Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 MIR5739-201ENST00000619803 80 ntBASIC3.01□□□□□ -1.93
CCDC138Q96M89 MTND4P12-201ENST00000498999 1377 ntBASIC3□□□□□ -1.93
CCDC138Q96M89 AC092268.1-201ENST00000342691 405 ntBASIC3□□□□□ -1.93
CCDC138Q96M89 RNU1-72P-201ENST00000362976 153 ntBASIC3□□□□□ -1.93
CCDC138Q96M89 Y_RNA.142-201ENST00000363491 102 ntBASIC3□□□□□ -1.93
CCDC138Q96M89 SNORA38.1-201ENST00000364172 131 ntBASIC3□□□□□ -1.93
CCDC138Q96M89 U8.8-201ENST00000365399 135 ntBASIC3□□□□□ -1.93
CCDC138Q96M89 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC138Q96M89 AL356432.1-201ENST00000405809 419 ntBASIC3□□□□□ -1.93
CCDC138Q96M89 RNA5SP274-201ENST00000410484 108 ntBASIC3□□□□□ -1.93
CCDC138Q96M89 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3□□□□□ -1.93
CCDC138Q96M89 EIF1AXP1-201ENST00000419267 435 ntBASIC3□□□□□ -1.93
CCDC138Q96M89 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3□□□□□ -1.93
CCDC138Q96M89 USP9YP8-201ENST00000441913 500 ntBASIC3□□□□□ -1.93
CCDC138Q96M89 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3□□□□□ -1.93
CCDC138Q96M89 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3□□□□□ -1.93
CCDC138Q96M89 AC104564.1-201ENST00000493028 407 ntBASIC3□□□□□ -1.93
CCDC138Q96M89 AC091951.2-201ENST00000500762 203 ntBASIC3□□□□□ -1.93
CCDC138Q96M89 RNU5F-2P-201ENST00000516066 82 ntBASIC3□□□□□ -1.93
CCDC138Q96M89 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3□□□□□ -1.93
CCDC138Q96M89 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3□□□□□ -1.93
CCDC138Q96M89 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3□□□□□ -1.93
CCDC138Q96M89 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3□□□□□ -1.93
CCDC138Q96M89 MTCO3P13-201ENST00000577757 781 ntBASIC3□□□□□ -1.93
CCDC138Q96M89 MIR3136-201ENST00000583498 78 ntBASIC3□□□□□ -1.93
CCDC138Q96M89 MIR5195-201ENST00000583555 115 ntBASIC3□□□□□ -1.93
CCDC138Q96M89 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3□□□□□ -1.93
CCDC138Q96M89 AL359198.2-201ENST00000611836 194 ntBASIC3□□□□□ -1.93
CCDC138Q96M89 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
CCDC138Q96M89 RNU6-142P-201ENST00000384019 107 ntBASIC2.99□□□□□ -1.93
CCDC138Q96M89 Y_RNA.504-201ENST00000384481 104 ntBASIC2.99□□□□□ -1.93
CCDC138Q96M89 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CCDC138Q96M89 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.99□□□□□ -1.93
CCDC138Q96M89 RPL37P10-201ENST00000412884 288 ntBASIC2.99□□□□□ -1.93
CCDC138Q96M89 RPS3AP52-201ENST00000435639 297 ntBASIC2.99□□□□□ -1.93
CCDC138Q96M89 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC138Q96M89 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC138Q96M89 AC104389.3-201ENST00000445629 235 ntBASIC2.99□□□□□ -1.93
CCDC138Q96M89 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC138Q96M89 AC116337.1-201ENST00000509680 687 ntBASIC2.99□□□□□ -1.93
CCDC138Q96M89 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC138Q96M89 AC091874.1-201ENST00000511402 339 ntBASIC2.99□□□□□ -1.93
CCDC138Q96M89 ACA59.1-201ENST00000515966 143 ntBASIC2.99□□□□□ -1.93
CCDC138Q96M89 RNU6-875P-201ENST00000516488 106 ntBASIC2.99□□□□□ -1.93
CCDC138Q96M89 AC134698.4-201ENST00000523451 826 ntBASIC2.99□□□□□ -1.93
CCDC138Q96M89 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC138Q96M89 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC138Q96M89 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC138Q96M89 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC138Q96M89 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC138Q96M89 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC138Q96M89 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC138Q96M89 AL670379.2-201ENST00000604983 252 ntBASIC2.99□□□□□ -1.93
CCDC138Q96M89 AC025253.1-201ENST00000613623 543 ntBASIC2.99□□□□□ -1.93
CCDC138Q96M89 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC138Q96M89 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC138Q96M89 MAPK10-266ENST00000641066 6555 ntBASIC2.99□□□□□ -1.93
CCDC138Q96M89 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC138Q96M89 Y_RNA.123-201ENST00000363338 102 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 RNU6-593P-201ENST00000364716 112 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 RNU6-306P-201ENST00000384617 107 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 SNORD67-201ENST00000390833 111 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 RN7SKP158-201ENST00000410453 326 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 AL590135.1-201ENST00000422215 156 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 AC019205.3-201ENST00000424573 156 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 GPM6BP3-201ENST00000442797 145 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 AC016700.2-201ENST00000446011 156 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 CYP2C59P-201ENST00000457790 269 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 AC090515.1-201ENST00000465295 476 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 AC008571.1-201ENST00000467232 300 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 RN7SL20P-201ENST00000488827 297 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 AC015911.1-201ENST00000495111 156 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 CKS1BP2-201ENST00000497342 240 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 HMGB1P35-201ENST00000503360 598 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC138Q96M89 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC138Q96M89 HSPE1P20-201ENST00000538133 289 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 AC023824.2-201ENST00000566185 400 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 AC093249.1-201ENST00000567049 203 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 RPL23AP88-201ENST00000605759 454 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 AC104260.1-201ENST00000616660 539 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 MIR8057-201ENST00000620957 69 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 AL008636.1-201ENST00000625038 1018 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 MIR6733-201ENST00000635723 61 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 SNORD98-201ENST00000636377 67 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CCDC138Q96M89 AC009487.2-201ENST00000420969 6821 ntBASIC2.98□□□□□ -1.93
CCDC138Q96M89 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC138Q96M89 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC138Q96M89 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC138Q96M89 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC138Q96M89 RNU4-56P-201ENST00000364700 142 ntBASIC2.97□□□□□ -1.93
CCDC138Q96M89 SNORA54-201ENST00000384281 123 ntBASIC2.97□□□□□ -1.93
CCDC138Q96M89 RNU6-1009P-201ENST00000390996 107 ntBASIC2.97□□□□□ -1.93
CCDC138Q96M89 RNU2-63P-201ENST00000410792 194 ntBASIC2.97□□□□□ -1.93
CCDC138Q96M89 RNA5SP492-201ENST00000411330 114 ntBASIC2.97□□□□□ -1.93
CCDC138Q96M89 Z82205.1-201ENST00000428456 297 ntBASIC2.97□□□□□ -1.93
CCDC138Q96M89 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC138Q96M89 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC138Q96M89 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms