Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 SNORD115-47-201ENST00000391226 86 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 Y_RNA.599-201ENST00000410489 109 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 RNU4-53P-201ENST00000410828 140 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 OR9R1P-201ENST00000412200 877 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 SNORD56-201ENST00000413522 71 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.54□□□□□ -2.16
LINC00477Q96M19 AL356320.1-201ENST00000429616 163 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.54□□□□□ -2.16
LINC00477Q96M19 MRPS10P2-201ENST00000431226 381 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 FABP5P14-201ENST00000437273 393 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.54□□□□□ -2.16
LINC00477Q96M19 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.54□□□□□ -2.16
LINC00477Q96M19 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.54□□□□□ -2.16
LINC00477Q96M19 RPL30P12-201ENST00000474666 353 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 AC069439.1-201ENST00000494739 167 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 AC091874.1-201ENST00000511402 339 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 AC104136.1-201ENST00000512969 394 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 AC010493.1-201ENST00000513479 292 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 RNA5SP112-201ENST00000515937 99 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 Y_RNA.665-201ENST00000516177 98 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 AP005597.4-201ENST00000526762 229 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 AP003034.1-201ENST00000534621 422 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.54□□□□□ -2.16
LINC00477Q96M19 AC103996.1-201ENST00000555468 102 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 MIR3126-201ENST00000577443 74 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 MIR4765-201ENST00000585007 77 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 BNIP3P25-201ENST00000596023 559 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 AL670379.10-201ENST00000604330 253 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 AL670379.9-201ENST00000605428 253 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 U6.42-201ENST00000618440 107 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 AC244517.12-201ENST00000623581 663 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 IGHVIII-44-202ENST00000636235 289 ntBASIC1.54□□□□□ -2.16
LINC00477Q96M19 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.54□□□□□ -2.16
LINC00477Q96M19 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
LINC00477Q96M19 RNU6-336P-201ENST00000364891 107 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 RNU4-66P-201ENST00000365199 138 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
LINC00477Q96M19 Y_RNA.399-201ENST00000383955 105 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 RNU6-692P-201ENST00000384496 107 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
LINC00477Q96M19 MIR676-201ENST00000390702 67 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 SNORA40.19-201ENST00000390846 128 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 AL591034.2-201ENST00000402839 359 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 AL606923.1-201ENST00000406616 190 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 RNU2-63P-201ENST00000410792 194 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 AL135786.1-201ENST00000415892 214 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 EDDM3CP-201ENST00000415977 425 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 AC074117.2-201ENST00000417130 397 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 AL117339.3-201ENST00000418733 162 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC00477Q96M19 MTCO1P20-201ENST00000425366 358 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.53□□□□□ -2.16
LINC00477Q96M19 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 Z75746.1-201ENST00000440243 2080 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 AC007969.2-201ENST00000441891 191 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC00477Q96M19 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC00477Q96M19 RNU7-167P-201ENST00000459160 62 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 RNU7-66P-201ENST00000459469 62 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 AC092989.1-201ENST00000481235 277 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 RPS29P25-201ENST00000481709 171 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 HMGB1P30-201ENST00000492455 606 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC00477Q96M19 RNU6-1281P-201ENST00000516223 105 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 ANP32BP3-201ENST00000559213 706 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 MIR5692A1-201ENST00000580523 69 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC00477Q96M19 AC068790.6-201ENST00000602558 258 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 AL713866.2-201ENST00000603579 219 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 AC021646.1-201ENST00000605469 484 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 RNU6-89P-201ENST00000606519 100 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 AC092807.2-201ENST00000609367 243 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 AC064836.2-201ENST00000609491 462 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 AL359854.1-201ENST00000614203 1594 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 AC026585.1-201ENST00000619582 524 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 AC098679.4-201ENST00000624241 654 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC00477Q96M19 U4.7-201ENST00000638126 106 ntBASIC1.53□□□□□ -2.16
LINC00477Q96M19 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
LINC00477Q96M19 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.53□□□□□ -2.17
LINC00477Q96M19 MTND5P6-201ENST00000422338 1798 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 RNU6-1252P-201ENST00000363054 104 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 RNU6-1322P-201ENST00000364309 107 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 RNU6-827P-201ENST00000365553 106 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 XGY1-201ENST00000381172 446 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 RNU6-434P-201ENST00000384376 107 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 RNU6-843P-201ENST00000384454 104 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 RNU6-748P-201ENST00000384648 107 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
LINC00477Q96M19 AL356432.1-201ENST00000405809 419 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 AL158823.1-201ENST00000418441 478 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC00477Q96M19 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.52□□□□□ -2.17
LINC00477Q96M19 RPL21P99-201ENST00000480369 423 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 RPL36AP48-201ENST00000485521 314 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.52□□□□□ -2.17
LINC00477Q96M19 AC140059.1-201ENST00000489238 361 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
LINC00477Q96M19 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms