Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RNU6-61P-201ENST00000365528 109 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 RNU6-611P-201ENST00000384276 104 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 RNU6-997P-201ENST00000384725 107 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 MIR520E-201ENST00000384867 87 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 AL356432.1-201ENST00000405809 419 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 MIR1262-201ENST00000408276 93 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 SRIP3-201ENST00000413200 219 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 SNORD56-201ENST00000413522 71 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.68□□□□□ -2.14
USP47Q96K76 MTCYBP5-201ENST00000423752 1135 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 AC006026.2-201ENST00000457376 180 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 RPS29P1-201ENST00000465274 159 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 SNORA3.4-201ENST00000515969 96 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 RNU1-86P-201ENST00000516108 154 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 Y_RNA.672-201ENST00000516289 104 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 RNU1-107P-201ENST00000516617 154 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 RNU6-965P-201ENST00000516721 96 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.68□□□□□ -2.14
USP47Q96K76 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.68□□□□□ -2.14
USP47Q96K76 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.68□□□□□ -2.14
USP47Q96K76 AC112191.3-201ENST00000604371 277 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 AC005296.1-201ENST00000616145 209 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 AL132822.1-201ENST00000617063 513 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 AC007792.1-201ENST00000623023 402 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 AC093648.1-201ENST00000623546 606 ntBASIC1.68□□□□□ -2.14
USP47Q96K76 snoU2_19.1-201ENST00000362361 80 ntBASIC1.67□□□□□ -2.14
USP47Q96K76 Y_RNA.22-201ENST00000362492 102 ntBASIC1.67□□□□□ -2.14
USP47Q96K76 RNU11-3P-201ENST00000391111 133 ntBASIC1.67□□□□□ -2.14
USP47Q96K76 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.67□□□□□ -2.14
USP47Q96K76 CALM2P2-201ENST00000428512 440 ntBASIC1.67□□□□□ -2.14
USP47Q96K76 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.67□□□□□ -2.14
USP47Q96K76 UBE2D3P4-201ENST00000441973 436 ntBASIC1.67□□□□□ -2.14
USP47Q96K76 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.67□□□□□ -2.14
USP47Q96K76 AL360271.2-201ENST00000447710 161 ntBASIC1.67□□□□□ -2.14
USP47Q96K76 AL353752.1-201ENST00000454946 260 ntBASIC1.67□□□□□ -2.14
USP47Q96K76 PRELID3BP1-201ENST00000457142 540 ntBASIC1.67□□□□□ -2.14
USP47Q96K76 snoU109.1-201ENST00000459339 135 ntBASIC1.67□□□□□ -2.14
USP47Q96K76 AC022616.3-201ENST00000523940 148 ntBASIC1.67□□□□□ -2.14
USP47Q96K76 RPL21P5-201ENST00000554662 472 ntBASIC1.67□□□□□ -2.14
USP47Q96K76 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.67□□□□□ -2.14
USP47Q96K76 AC005771.1-201ENST00000585581 349 ntBASIC1.67□□□□□ -2.14
USP47Q96K76 FAM106DP-201ENST00000586416 501 ntBASIC1.67□□□□□ -2.14
USP47Q96K76 AL353778.1-201ENST00000603149 408 ntBASIC1.67□□□□□ -2.14
USP47Q96K76 AC063943.3-201ENST00000615562 356 ntBASIC1.67□□□□□ -2.14
USP47Q96K76 AC026585.1-201ENST00000619582 524 ntBASIC1.67□□□□□ -2.14
USP47Q96K76 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.67□□□□□ -2.14
USP47Q96K76 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
USP47Q96K76 RNA5SP212-201ENST00000391223 107 ntBASIC1.66□□□□□ -2.14
USP47Q96K76 RPL23AP32-201ENST00000395315 459 ntBASIC1.66□□□□□ -2.14
USP47Q96K76 MIR1283-2-201ENST00000408621 87 ntBASIC1.66□□□□□ -2.14
USP47Q96K76 C1DP2-201ENST00000418167 426 ntBASIC1.66□□□□□ -2.14
USP47Q96K76 AC244636.1-201ENST00000421152 228 ntBASIC1.66□□□□□ -2.14
USP47Q96K76 AL121601.2-201ENST00000438019 707 ntBASIC1.66□□□□□ -2.14
USP47Q96K76 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.66□□□□□ -2.14
USP47Q96K76 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.66□□□□□ -2.14
USP47Q96K76 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.66□□□□□ -2.14
USP47Q96K76 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.66□□□□□ -2.14
USP47Q96K76 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.66□□□□□ -2.14
USP47Q96K76 DUXAP5-201ENST00000529668 529 ntBASIC1.66□□□□□ -2.14
USP47Q96K76 AC022616.8-201ENST00000533569 253 ntBASIC1.66□□□□□ -2.14
USP47Q96K76 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.66□□□□□ -2.14
USP47Q96K76 MIR5692A1-201ENST00000580523 69 ntBASIC1.66□□□□□ -2.14
USP47Q96K76 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.66□□□□□ -2.14
USP47Q96K76 AC012065.4-201ENST00000602445 679 ntBASIC1.66□□□□□ -2.14
USP47Q96K76 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.66□□□□□ -2.14
USP47Q96K76 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.66□□□□□ -2.14
USP47Q96K76 RMST_7.1-201ENST00000621935 268 ntBASIC1.66□□□□□ -2.14
USP47Q96K76 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
USP47Q96K76 RNU6-743P-201ENST00000364151 106 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 SNORA20.2-201ENST00000383922 131 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 SNORA8-201ENST00000384574 139 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 MIR29C-201ENST00000385231 88 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 RNU2-8P-201ENST00000410727 190 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 EEF1A1P40-201ENST00000412883 573 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 BTF3L4P1-201ENST00000413813 468 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 AC015922.2-201ENST00000435593 184 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 AC245102.2-201ENST00000448956 180 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.65□□□□□ -2.15
USP47Q96K76 snoU13.14-201ENST00000459372 104 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 MTCO3P9-201ENST00000506989 781 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 PTP4A1P4-201ENST00000512479 322 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 RNU6-1223P-201ENST00000517124 104 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 RNU6-1220P-201ENST00000517126 108 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 AP005639.2-201ENST00000527592 928 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.65□□□□□ -2.15
USP47Q96K76 AP002453.2-201ENST00000533503 320 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 AC002400.1-201ENST00000569310 726 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 AC078795.2-201ENST00000602835 1252 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.65□□□□□ -2.15
USP47Q96K76 AL050303.3-201ENST00000613704 284 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 AL133173.2-201ENST00000614270 90 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 PVT1_3.1-201ENST00000620853 95 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 AC019226.2-201ENST00000625973 424 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 AC099654.13-201ENST00000639774 207 ntBASIC1.65□□□□□ -2.15
USP47Q96K76 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
USP47Q96K76 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
USP47Q96K76 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
USP47Q96K76 RNA5SP325-201ENST00000363756 130 ntBASIC1.64□□□□□ -2.15
USP47Q96K76 RNU6-1080P-201ENST00000383982 107 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms