Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CHMP4CQ96CF2 RNU1-35P-201ENST00000362782 153 ntBASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 RNU6-227P-201ENST00000362865 103 ntBASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 RNU6-797P-201ENST00000363101 109 ntBASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 BTF3L4P2-201ENST00000392798 346 ntBASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 RPL23AP58-201ENST00000440453 469 ntBASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 AC112771.1-201ENST00000463581 102 ntBASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 SNRPGP7-201ENST00000469016 106 ntBASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 RPL30P12-201ENST00000474666 353 ntBASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 AC083906.5-201ENST00000503722 328 ntBASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 AC008549.1-201ENST00000512900 643 ntBASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 AC010620.2-201ENST00000600135 313 ntBASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 AP001836.1-201ENST00000604675 523 ntBASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 AL359198.2-201ENST00000611836 194 ntBASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 AC007792.1-201ENST00000623023 402 ntBASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 MIR7515-201ENST00000637837 67 ntBASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHMP4CQ96CF2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CHMP4CQ96CF2 AC002543.1-201ENST00000299783 1954 ntBASIC3.42□□□□□ -1.86
CHMP4CQ96CF2 RNU6-1297P-201ENST00000384415 104 ntBASIC3.42□□□□□ -1.86
CHMP4CQ96CF2 MIR512-1-201ENST00000384913 84 ntBASIC3.42□□□□□ -1.86
CHMP4CQ96CF2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CHMP4CQ96CF2 AP000275.1-201ENST00000411943 390 ntBASIC3.42□□□□□ -1.86
CHMP4CQ96CF2 MTND3P23-201ENST00000431980 347 ntBASIC3.42□□□□□ -1.86
CHMP4CQ96CF2 RPL39P29-201ENST00000447779 157 ntBASIC3.42□□□□□ -1.86
CHMP4CQ96CF2 AC091826.1-201ENST00000514065 313 ntBASIC3.42□□□□□ -1.86
CHMP4CQ96CF2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CHMP4CQ96CF2 AC093732.2-201ENST00000607950 274 ntBASIC3.42□□□□□ -1.86
CHMP4CQ96CF2 MIR8076-201ENST00000611401 83 ntBASIC3.42□□□□□ -1.86
CHMP4CQ96CF2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CHMP4CQ96CF2 PISRT1.1-201ENST00000616930 107 ntBASIC3.42□□□□□ -1.86
CHMP4CQ96CF2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 RNU6-1222P-201ENST00000384615 107 ntBASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 RNU6-1140P-201ENST00000410517 106 ntBASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 RNU6-370P-201ENST00000411008 104 ntBASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 SAR1AP4-201ENST00000429225 591 ntBASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 AL133396.1-201ENST00000432048 687 ntBASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 AC008571.1-201ENST00000467232 300 ntBASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 PTP4A1P4-201ENST00000512479 322 ntBASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 RNA5SP112-201ENST00000515937 99 ntBASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 SNORA9.3-201ENST00000516383 129 ntBASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 AC093027.1-201ENST00000546698 429 ntBASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 GTF3AP2-201ENST00000557014 266 ntBASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 MIR4795-201ENST00000584182 89 ntBASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CHMP4CQ96CF2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.4□□□□□ -1.86
CHMP4CQ96CF2 RNU6-212P-201ENST00000362642 104 ntBASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 RNU6-1010P-201ENST00000362757 107 ntBASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 Y_RNA.67-201ENST00000362870 100 ntBASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 RNU4-14P-201ENST00000410858 122 ntBASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 Y_RNA.708-201ENST00000516950 96 ntBASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 HPRT1P3-201ENST00000539521 576 ntBASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 AC079600.2-201ENST00000550076 130 ntBASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 FRG2DP-202ENST00000566967 323 ntBASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 AL356157.2-201ENST00000605122 111 ntBASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 AC018462.2-201ENST00000605375 395 ntBASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 AL359757.2-201ENST00000624309 274 ntBASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 AL359697.1-201ENST00000624879 587 ntBASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 AC009541.1-201ENST00000438279 2662 ntBASIC3.4□□□□□ -1.87
CHMP4CQ96CF2 MTND4P29-201ENST00000503122 1372 ntBASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 Z75746.1-201ENST00000440243 2080 ntBASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 MIR26A1-201ENST00000362205 77 ntBASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 U8.8-201ENST00000365399 135 ntBASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 RNU6-1050P-201ENST00000410388 107 ntBASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 RNU2-23P-201ENST00000410545 195 ntBASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 AC097463.2-201ENST00000421074 142 ntBASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 USP9YP30-201ENST00000430729 455 ntBASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 SNORA25.11-201ENST00000515935 105 ntBASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 AC079598.5-201ENST00000547460 117 ntBASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 AC109446.1-201ENST00000566172 220 ntBASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 MIR3605-201ENST00000583214 100 ntBASIC3.39□□□□□ -1.87
CHMP4CQ96CF2 AC078795.3-201ENST00000602913 472 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms