Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RPL21P99-201ENST00000480369 423 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 AC079804.2-201ENST00000490376 200 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 RPL38P4-201ENST00000502376 214 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 AC016632.1-201ENST00000503994 196 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.27□□□□□ -2.05
VPS33AQ96AX1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS33AQ96AX1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.27□□□□□ -2.05
VPS33AQ96AX1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS33AQ96AX1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.27□□□□□ -2.05
VPS33AQ96AX1 AL162413.1-201ENST00000603198 110 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 AC092807.2-201ENST00000609367 243 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 AC004908.3-201ENST00000610248 625 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 AC022202.1-201ENST00000613515 211 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 AC015540.1-201ENST00000615828 501 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 AC068137.3-201ENST00000639191 341 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 AC099654.12-201ENST00000639868 649 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
VPS33AQ96AX1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS33AQ96AX1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
VPS33AQ96AX1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS33AQ96AX1 AC121333.1-201ENST00000567488 2709 ntBASIC2.26□□□□□ -2.05
VPS33AQ96AX1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
VPS33AQ96AX1 AP006437.1-201ENST00000641440 3685 ntBASIC2.26□□□□□ -2.05
VPS33AQ96AX1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
VPS33AQ96AX1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS33AQ96AX1 SNORA70.4-201ENST00000365509 134 ntBASIC2.26□□□□□ -2.05
VPS33AQ96AX1 MIR29C-201ENST00000385231 88 ntBASIC2.26□□□□□ -2.05
VPS33AQ96AX1 AP000275.1-201ENST00000411943 390 ntBASIC2.26□□□□□ -2.05
VPS33AQ96AX1 SRIP3-201ENST00000413200 219 ntBASIC2.26□□□□□ -2.05
VPS33AQ96AX1 AC016907.1-201ENST00000419483 435 ntBASIC2.26□□□□□ -2.05
VPS33AQ96AX1 WARS2P1-201ENST00000429678 537 ntBASIC2.26□□□□□ -2.05
VPS33AQ96AX1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.26□□□□□ -2.05
VPS33AQ96AX1 AC245102.2-201ENST00000448956 180 ntBASIC2.26□□□□□ -2.05
VPS33AQ96AX1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.26□□□□□ -2.05
VPS33AQ96AX1 SNRPGP7-201ENST00000469016 106 ntBASIC2.26□□□□□ -2.05
VPS33AQ96AX1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS33AQ96AX1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.26□□□□□ -2.05
VPS33AQ96AX1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS33AQ96AX1 HSPE1P4-201ENST00000550617 308 ntBASIC2.26□□□□□ -2.05
VPS33AQ96AX1 AC245505.1-201ENST00000556398 224 ntBASIC2.26□□□□□ -2.05
VPS33AQ96AX1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS33AQ96AX1 AC007229.1-201ENST00000590455 412 ntBASIC2.26□□□□□ -2.05
VPS33AQ96AX1 AL160281.1-201ENST00000605307 311 ntBASIC2.26□□□□□ -2.05
VPS33AQ96AX1 AL160394.1-201ENST00000624765 724 ntBASIC2.26□□□□□ -2.05
VPS33AQ96AX1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.26□□□□□ -2.05
VPS33AQ96AX1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VPS33AQ96AX1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.26□□□□□ -2.05
VPS33AQ96AX1 RNU4-15P-201ENST00000362613 141 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 RNU4-40P-201ENST00000364351 143 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 Y_RNA.231-201ENST00000364358 102 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 RNU4-75P-201ENST00000364621 146 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 SNORA51.11-201ENST00000384442 131 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 MIR491-201ENST00000384877 84 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS33AQ96AX1 AL590135.1-201ENST00000422215 156 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 AC019205.3-201ENST00000424573 156 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 AC016700.2-201ENST00000446011 156 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS33AQ96AX1 AC108938.1-201ENST00000451204 136 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS33AQ96AX1 RNU6-1037P-201ENST00000459571 107 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 AC015911.1-201ENST00000495111 156 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 AC026436.1-201ENST00000510537 270 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 SNORA19.2-201ENST00000516013 114 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 RNU6-1281P-201ENST00000516223 105 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 RNU6-1038P-201ENST00000516516 104 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 RNU6-506P-201ENST00000516553 94 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 TRAV32-201ENST00000553993 340 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 AC007375.1-201ENST00000554513 578 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 AC027807.1-201ENST00000559921 996 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 MIR4319-201ENST00000577285 85 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 MIR3200-201ENST00000580767 85 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VPS33AQ96AX1 AC092954.2-201ENST00000609103 430 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 AC063943.3-201ENST00000615562 356 ntBASIC2.25□□□□□ -2.05
VPS33AQ96AX1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
VPS33AQ96AX1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.24□□□□□ -2.05
VPS33AQ96AX1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
VPS33AQ96AX1 RNA5SP387-201ENST00000364226 106 ntBASIC2.24□□□□□ -2.05
VPS33AQ96AX1 SNORD32B-201ENST00000364460 84 ntBASIC2.24□□□□□ -2.05
VPS33AQ96AX1 SNORA16B-201ENST00000364674 135 ntBASIC2.24□□□□□ -2.05
VPS33AQ96AX1 EIF4E2P1-201ENST00000393781 255 ntBASIC2.24□□□□□ -2.05
VPS33AQ96AX1 AL359511.1-201ENST00000402970 211 ntBASIC2.24□□□□□ -2.05
VPS33AQ96AX1 RN7SKP284-201ENST00000411002 343 ntBASIC2.24□□□□□ -2.05
VPS33AQ96AX1 AC063976.3-201ENST00000426849 329 ntBASIC2.24□□□□□ -2.05
VPS33AQ96AX1 DLGAP5P1-201ENST00000430307 464 ntBASIC2.24□□□□□ -2.05
VPS33AQ96AX1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.24□□□□□ -2.05
VPS33AQ96AX1 RPS3AP12-201ENST00000443616 753 ntBASIC2.24□□□□□ -2.05
VPS33AQ96AX1 PRELID3BP1-201ENST00000457142 540 ntBASIC2.24□□□□□ -2.05
VPS33AQ96AX1 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.24□□□□□ -2.05
VPS33AQ96AX1 RNU6-323P-201ENST00000521915 107 ntBASIC2.24□□□□□ -2.05
VPS33AQ96AX1 AP005597.4-201ENST00000526762 229 ntBASIC2.24□□□□□ -2.05
VPS33AQ96AX1 AC093783.1-201ENST00000612976 329 ntBASIC2.24□□□□□ -2.05
VPS33AQ96AX1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.24□□□□□ -2.05
VPS33AQ96AX1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
VPS33AQ96AX1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.23□□□□□ -2.05
VPS33AQ96AX1 AC062016.1-201ENST00000355719 319 ntBASIC2.23□□□□□ -2.05
VPS33AQ96AX1 MIR518A2-201ENST00000384966 87 ntBASIC2.23□□□□□ -2.05
VPS33AQ96AX1 SNORD73A-201ENST00000386062 65 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms