Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PTP4A1Q93096 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
PTP4A1Q93096 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.06□□□□□ -2.08
PTP4A1Q93096 MIRLET7G-201ENST00000362280 84 ntBASIC2.05□□□□□ -2.08
PTP4A1Q93096 Y_RNA.159-201ENST00000363674 87 ntBASIC2.05□□□□□ -2.08
PTP4A1Q93096 SNORA75-201ENST00000384158 137 ntBASIC2.05□□□□□ -2.08
PTP4A1Q93096 RNU6-692P-201ENST00000384496 107 ntBASIC2.05□□□□□ -2.08
PTP4A1Q93096 Y_RNA.553-201ENST00000384670 102 ntBASIC2.05□□□□□ -2.08
PTP4A1Q93096 MIR676-201ENST00000390702 67 ntBASIC2.05□□□□□ -2.08
PTP4A1Q93096 HMGN2P19-201ENST00000425149 265 ntBASIC2.05□□□□□ -2.08
PTP4A1Q93096 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.05□□□□□ -2.08
PTP4A1Q93096 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.05□□□□□ -2.08
PTP4A1Q93096 AL163973.1-201ENST00000484753 577 ntBASIC2.05□□□□□ -2.08
PTP4A1Q93096 AC145146.1-201ENST00000496370 254 ntBASIC2.05□□□□□ -2.08
PTP4A1Q93096 AC009646.1-201ENST00000510455 318 ntBASIC2.05□□□□□ -2.08
PTP4A1Q93096 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.05□□□□□ -2.08
PTP4A1Q93096 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.05□□□□□ -2.08
PTP4A1Q93096 MIR3923-201ENST00000579521 83 ntBASIC2.05□□□□□ -2.08
PTP4A1Q93096 AC008749.1-201ENST00000597650 306 ntBASIC2.05□□□□□ -2.08
PTP4A1Q93096 AC007684.1-201ENST00000609671 477 ntBASIC2.05□□□□□ -2.08
PTP4A1Q93096 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.05□□□□□ -2.08
PTP4A1Q93096 uc_338.34-201ENST00000617467 174 ntBASIC2.05□□□□□ -2.08
PTP4A1Q93096 AC130454.1-201ENST00000622948 401 ntBASIC2.05□□□□□ -2.08
PTP4A1Q93096 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
PTP4A1Q93096 U3.12-201ENST00000364498 214 ntBASIC2.04□□□□□ -2.08
PTP4A1Q93096 RNU6-827P-201ENST00000365553 106 ntBASIC2.04□□□□□ -2.08
PTP4A1Q93096 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
PTP4A1Q93096 RNU6-160P-201ENST00000384591 107 ntBASIC2.04□□□□□ -2.08
PTP4A1Q93096 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
PTP4A1Q93096 AL606923.1-201ENST00000406616 190 ntBASIC2.04□□□□□ -2.08
PTP4A1Q93096 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.04□□□□□ -2.08
PTP4A1Q93096 AC009963.1-201ENST00000417265 157 ntBASIC2.04□□□□□ -2.08
PTP4A1Q93096 MTCO2P34-201ENST00000421994 607 ntBASIC2.04□□□□□ -2.08
PTP4A1Q93096 BX510359.4-201ENST00000423750 193 ntBASIC2.04□□□□□ -2.08
PTP4A1Q93096 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.04□□□□□ -2.08
PTP4A1Q93096 MTND4P1-201ENST00000457501 1466 ntBASIC2.04□□□□□ -2.08
PTP4A1Q93096 RN7SL636P-201ENST00000497504 294 ntBASIC2.04□□□□□ -2.08
PTP4A1Q93096 AC010424.1-201ENST00000506336 297 ntBASIC2.04□□□□□ -2.08
PTP4A1Q93096 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.04□□□□□ -2.08
PTP4A1Q93096 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.04□□□□□ -2.08
PTP4A1Q93096 OR11H5P-201ENST00000554039 926 ntBASIC2.04□□□□□ -2.08
PTP4A1Q93096 AC009314.1-201ENST00000603871 304 ntBASIC2.04□□□□□ -2.08
PTP4A1Q93096 AL354950.2-201ENST00000617939 290 ntBASIC2.04□□□□□ -2.08
PTP4A1Q93096 AC243829.7-201ENST00000633081 225 ntBASIC2.04□□□□□ -2.08
PTP4A1Q93096 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.04□□□□□ -2.08
PTP4A1Q93096 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PTP4A1Q93096 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.03□□□□□ -2.08
PTP4A1Q93096 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
PTP4A1Q93096 RNU6-26P-201ENST00000383985 107 ntBASIC2.03□□□□□ -2.08
PTP4A1Q93096 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.03□□□□□ -2.08
PTP4A1Q93096 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.03□□□□□ -2.08
PTP4A1Q93096 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.03□□□□□ -2.08
PTP4A1Q93096 UBE2V1P4-201ENST00000425374 344 ntBASIC2.03□□□□□ -2.08
PTP4A1Q93096 HMGN2P3-201ENST00000433603 273 ntBASIC2.03□□□□□ -2.08
PTP4A1Q93096 HMGN2P5-201ENST00000436882 273 ntBASIC2.03□□□□□ -2.08
PTP4A1Q93096 AL451074.3-201ENST00000437709 472 ntBASIC2.03□□□□□ -2.08
PTP4A1Q93096 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.03□□□□□ -2.08
PTP4A1Q93096 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.03□□□□□ -2.08
PTP4A1Q93096 RNA5SP57-201ENST00000459463 123 ntBASIC2.03□□□□□ -2.08
PTP4A1Q93096 ANXA2P1-201ENST00000505539 926 ntBASIC2.03□□□□□ -2.08
PTP4A1Q93096 AC234781.5-201ENST00000508429 271 ntBASIC2.03□□□□□ -2.08
PTP4A1Q93096 AC005741.1-201ENST00000511094 432 ntBASIC2.03□□□□□ -2.08
PTP4A1Q93096 AC008413.1-201ENST00000511864 177 ntBASIC2.03□□□□□ -2.08
PTP4A1Q93096 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.03□□□□□ -2.08
PTP4A1Q93096 AP005660.1-201ENST00000522972 293 ntBASIC2.03□□□□□ -2.08
PTP4A1Q93096 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.03□□□□□ -2.08
PTP4A1Q93096 AC103996.1-201ENST00000555468 102 ntBASIC2.03□□□□□ -2.08
PTP4A1Q93096 AL158211.1-201ENST00000566763 763 ntBASIC2.03□□□□□ -2.08
PTP4A1Q93096 BNIP3P25-201ENST00000596023 559 ntBASIC2.03□□□□□ -2.08
PTP4A1Q93096 RNU6-85P-201ENST00000605989 107 ntBASIC2.03□□□□□ -2.08
PTP4A1Q93096 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.03□□□□□ -2.08
PTP4A1Q93096 AC104073.3-201ENST00000610942 955 ntBASIC2.03□□□□□ -2.08
PTP4A1Q93096 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
PTP4A1Q93096 MIR1248-201ENST00000629190 106 ntBASIC2.03□□□□□ -2.08
PTP4A1Q93096 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.02□□□□□ -2.09
PTP4A1Q93096 Y_RNA.1-201ENST00000352915 104 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 RNU4-15P-201ENST00000362613 141 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 SNORD32B-201ENST00000364460 84 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
PTP4A1Q93096 SNORA8-201ENST00000384574 139 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 MIR23A-201ENST00000385245 73 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 SNORD37.1-201ENST00000390968 65 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 MIR1283-2-201ENST00000408621 87 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 RNU2-40P-201ENST00000410833 196 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 EIF4EP2-201ENST00000422816 654 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 MTCYBP8-201ENST00000422855 651 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 AL133396.1-201ENST00000432048 687 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 SNAP23P1-201ENST00000433229 246 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 MTND1P26-201ENST00000440488 538 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 AC073415.1-201ENST00000449240 153 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.02□□□□□ -2.09
PTP4A1Q93096 MTCO2P18-201ENST00000457151 658 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 RNU7-180P-201ENST00000459240 63 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.02□□□□□ -2.09
PTP4A1Q93096 RNU6-991P-201ENST00000516168 107 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 RNA5SP490-201ENST00000517141 136 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.02□□□□□ -2.09
PTP4A1Q93096 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.02□□□□□ -2.09
PTP4A1Q93096 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.02□□□□□ -2.09
PTP4A1Q93096 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms