Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AP005902.1-201ENST00000521358 186 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.71□□□□□ -1.82
RTF1Q92541 AC008962.1-201ENST00000605729 304 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.71□□□□□ -1.82
RTF1Q92541 AC006157.1-201ENST00000611750 366 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 AC007485.1-201ENST00000616755 206 ntBASIC3.71□□□□□ -1.82
RTF1Q92541 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RTF1Q92541 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RTF1Q92541 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
RTF1Q92541 AC110774.1-201ENST00000623567 2018 ntBASIC3.7□□□□□ -1.82
RTF1Q92541 Y_RNA.500-201ENST00000384466 111 ntBASIC3.7□□□□□ -1.82
RTF1Q92541 AC009969.1-201ENST00000438726 172 ntBASIC3.7□□□□□ -1.82
RTF1Q92541 RN7SL75P-201ENST00000461926 281 ntBASIC3.7□□□□□ -1.82
RTF1Q92541 AC128713.1-201ENST00000471495 306 ntBASIC3.7□□□□□ -1.82
RTF1Q92541 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.7□□□□□ -1.82
RTF1Q92541 AC006445.2-201ENST00000510061 472 ntBASIC3.7□□□□□ -1.82
RTF1Q92541 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.7□□□□□ -1.82
RTF1Q92541 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.7□□□□□ -1.82
RTF1Q92541 RNU6-120P-201ENST00000516077 103 ntBASIC3.7□□□□□ -1.82
RTF1Q92541 RNU6-612P-201ENST00000516909 102 ntBASIC3.7□□□□□ -1.82
RTF1Q92541 NACAP3-201ENST00000552100 481 ntBASIC3.7□□□□□ -1.82
RTF1Q92541 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.7□□□□□ -1.82
RTF1Q92541 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.7□□□□□ -1.82
RTF1Q92541 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.7□□□□□ -1.82
RTF1Q92541 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.7□□□□□ -1.82
RTF1Q92541 MIR4680-201ENST00000580906 66 ntBASIC3.7□□□□□ -1.82
RTF1Q92541 MIR3609-201ENST00000582661 80 ntBASIC3.7□□□□□ -1.82
RTF1Q92541 AC006023.1-201ENST00000603944 259 ntBASIC3.7□□□□□ -1.82
RTF1Q92541 MIR6134-201ENST00000617606 109 ntBASIC3.7□□□□□ -1.82
RTF1Q92541 MTND4P1-201ENST00000457501 1466 ntBASIC3.7□□□□□ -1.82
RTF1Q92541 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RTF1Q92541 MTND5P7-201ENST00000413558 1798 ntBASIC3.7□□□□□ -1.82
RTF1Q92541 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RTF1Q92541 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTF1Q92541 AC093831.2-201ENST00000624393 3427 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
RTF1Q92541 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTF1Q92541 RNU6-428P-201ENST00000362942 107 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 RNU6-270P-201ENST00000364131 105 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 Y_RNA.459-201ENST00000384251 102 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 MIR521-1-201ENST00000384902 87 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 RNU6-985P-201ENST00000410182 104 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.69□□□□□ -1.82
RTF1Q92541 AC113618.1-201ENST00000416747 285 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 SSXP4-201ENST00000451349 245 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 GSTA11P-201ENST00000452866 669 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 UBE2DNL-203ENST00000474922 222 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 HMGN2P13-201ENST00000476476 274 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 AC006483.1-201ENST00000487308 313 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 RNU6-928P-201ENST00000516876 104 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 CBX3P8-201ENST00000532412 525 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 AC010186.2-204ENST00000537668 439 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 GNAI2P1-201ENST00000541815 315 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 DNAJC8P1-201ENST00000554535 372 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.69□□□□□ -1.82
RTF1Q92541 MIR6076-201ENST00000617521 113 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 AC008121.3-201ENST00000618726 433 ntBASIC3.69□□□□□ -1.82
RTF1Q92541 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RTF1Q92541 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTF1Q92541 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RTF1Q92541 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.69□□□□□ -1.82
RTF1Q92541 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
RTF1Q92541 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.68□□□□□ -1.82
RTF1Q92541 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.68□□□□□ -1.82
RTF1Q92541 MTND5P16-201ENST00000460269 1703 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RTF1Q92541 RNU1-35P-201ENST00000362782 153 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 RNU6-336P-201ENST00000364891 107 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 Y_RNA.577-201ENST00000384794 101 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 MIR512-1-201ENST00000384913 84 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.68□□□□□ -1.82
RTF1Q92541 AL160004.2-201ENST00000432935 350 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 MTND3P2-201ENST00000438452 342 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.68□□□□□ -1.82
RTF1Q92541 AL590664.1-201ENST00000448065 339 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.68□□□□□ -1.82
RTF1Q92541 RN7SL283P-201ENST00000489055 303 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 SNORA43.2-201ENST00000516652 128 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 RNU6-1137P-201ENST00000517073 99 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 AC079600.2-201ENST00000550076 130 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 MIR4319-201ENST00000577285 85 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.68□□□□□ -1.82
RTF1Q92541 MIR5696-201ENST00000578474 85 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 AP000942.4-201ENST00000604811 241 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 AC005014.2-201ENST00000607795 599 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 AC006111.3-201ENST00000622137 383 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 MAPK10-362ENST00000641864 4484 ntBASIC3.68□□□□□ -1.82
RTF1Q92541 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RTF1Q92541 RNY1P16-201ENST00000363063 111 ntBASIC3.67□□□□□ -1.82
RTF1Q92541 RNU6-898P-201ENST00000365627 104 ntBASIC3.67□□□□□ -1.82
RTF1Q92541 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.67□□□□□ -1.82
RTF1Q92541 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.67□□□□□ -1.82
RTF1Q92541 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.67□□□□□ -1.82
RTF1Q92541 AC099548.1-201ENST00000421443 426 ntBASIC3.67□□□□□ -1.82
RTF1Q92541 SNRPEP4-201ENST00000435815 279 ntBASIC3.67□□□□□ -1.82
RTF1Q92541 RPS29P27-201ENST00000463711 170 ntBASIC3.67□□□□□ -1.82
RTF1Q92541 FO393415.2-201ENST00000480085 343 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms