Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RPL31P63-201ENST00000422565 375 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 AL358934.1-201ENST00000432346 324 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 RPS29P29-201ENST00000456396 171 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 RN7SKP298-201ENST00000515950 94 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 SCARNA24.1-201ENST00000516465 137 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 AC015540.1-201ENST00000615828 501 ntBASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.47□□□□□ -2.17
SHROOM3Q8TF72 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.46□□□□□ -2.17
SHROOM3Q8TF72 MTND5P26-201ENST00000426018 1752 ntBASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 RNU6-1322P-201ENST00000364309 107 ntBASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 RNU2-49P-201ENST00000410666 184 ntBASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 RNU6-248P-201ENST00000410720 107 ntBASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 PGBD4P6-201ENST00000421501 610 ntBASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 MTCYBP8-201ENST00000422855 651 ntBASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 OSTCP8-201ENST00000445117 448 ntBASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 MTND2P33-201ENST00000506452 1031 ntBASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 AC010493.1-201ENST00000513479 292 ntBASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 AC112206.3-201ENST00000514578 389 ntBASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 AL138889.2-201ENST00000603883 242 ntBASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 AC025449.1-201ENST00000603896 529 ntBASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 AC097065.2-201ENST00000608159 533 ntBASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 AC004908.3-201ENST00000610248 625 ntBASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 AC136475.10-201ENST00000620253 385 ntBASIC1.46□□□□□ -2.18
SHROOM3Q8TF72 MTND5P17-201ENST00000418405 1603 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 MIR412-201ENST00000362142 91 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU6-1287P-201ENST00000362914 107 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU6-778P-201ENST00000363269 103 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU6-179P-201ENST00000363350 107 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU6-512P-201ENST00000364438 103 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU6-1042P-201ENST00000384204 107 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU6-1060P-201ENST00000384664 107 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 MIR524-201ENST00000385242 87 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU6-780P-201ENST00000391030 104 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 Y_RNA.623-201ENST00000411128 95 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 PTGES3P4-201ENST00000426243 356 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU6-953P-201ENST00000459154 107 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 DYNLL1P5-201ENST00000467158 270 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AC108078.1-201ENST00000508073 725 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 SMURF2P1-201ENST00000514992 481 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 SNORD27.1-201ENST00000516319 72 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNA5SP61-201ENST00000516453 100 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AP006587.4-201ENST00000526053 529 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 CYCSP26-201ENST00000534107 320 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AC016957.1-201ENST00000534895 309 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 MIR1273C-201ENST00000578669 77 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 MTATP6P3-201ENST00000581686 676 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 MIR5194-201ENST00000582634 120 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AL158032.1-201ENST00000605401 106 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 NDUFA8P1-201ENST00000605525 367 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 CDC27P3-201ENST00000635418 1910 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AL359854.1-201ENST00000614203 1594 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNY3P3-201ENST00000363816 102 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU4-40P-201ENST00000364351 143 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU4-75P-201ENST00000364621 146 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU5E-7P-201ENST00000365290 117 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU4-48P-201ENST00000365559 182 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU5A-6P-201ENST00000384136 116 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 SNORA75-201ENST00000384158 137 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU1-52P-201ENST00000384190 164 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU6-748P-201ENST00000384648 107 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU6-1072P-201ENST00000384703 107 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU6-19P-201ENST00000384718 107 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU6-443P-201ENST00000384780 107 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 SNORD37.1-201ENST00000390968 65 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RNU6-903P-201ENST00000391270 109 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AC092809.3-201ENST00000415453 231 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AC016907.1-201ENST00000419483 435 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AL365496.1-201ENST00000426885 215 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 GTF2IP20-201ENST00000431663 360 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 SNRPFP3-201ENST00000457792 225 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 RPS15AP34-201ENST00000487776 387 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AC011712.1-201ENST00000588959 234 ntBASIC1.45□□□□□ -2.18
SHROOM3Q8TF72 AL451064.1-201ENST00000607718 471 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms