Protein–RNA interactions for Protein: Q8TEQ0

SNX29, Sorting nexin-29, humanhuman

Predictions only

Length 813 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29Q8TEQ0 Y_RNA.703-201ENST00000516846 111 ntBASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 RNA5SP54-201ENST00000516951 92 ntBASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 MIR5685-201ENST00000579080 79 ntBASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 KLKP1-201ENST00000595979 403 ntBASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 SNORA62.6-201ENST00000606322 83 ntBASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 AC010999.1-201ENST00000611856 324 ntBASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 AL357075.2-201ENST00000614906 189 ntBASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 RNU6-47P-201ENST00000383866 107 ntBASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 SNORA26.3-201ENST00000391119 136 ntBASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 AC012306.1-201ENST00000423267 114 ntBASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 AC019205.3-201ENST00000424573 156 ntBASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 MTCO1P5-201ENST00000433573 344 ntBASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 AC112220.1-201ENST00000434628 355 ntBASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 RN7SL132P-201ENST00000478131 296 ntBASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 RNU6-1212P-201ENST00000517023 104 ntBASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX29Q8TEQ0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 RNU5F-3P-201ENST00000363767 117 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 RNU6-487P-201ENST00000365430 104 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 RNU6-622P-201ENST00000384272 103 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 RNA5SP390-201ENST00000410191 113 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 RPS26P42-201ENST00000413485 326 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 RPL23AP36-201ENST00000413895 458 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 AL591419.1-201ENST00000427423 339 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 AC109925.1-201ENST00000478069 331 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 RPS4XP13-201ENST00000483219 789 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 RPL7P47-201ENST00000497299 556 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 Y_RNA.683-201ENST00000516508 93 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 SNORA31.16-201ENST00000516773 139 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 AC022559.1-201ENST00000520905 205 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 HIGD1AP1-201ENST00000550979 275 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 RPL21P9-201ENST00000556149 474 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 HMGN2P15-201ENST00000585707 270 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 MIR486-1-201ENST00000612171 68 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 MIR3199-2-201ENST00000636243 86 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX29Q8TEQ0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 RNU6-1285P-201ENST00000363480 105 ntBASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 SNORA72.2-201ENST00000365028 127 ntBASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 Y_RNA.383-201ENST00000383855 97 ntBASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 RNU6-1289P-201ENST00000384431 106 ntBASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 RN7SKP156-201ENST00000410308 342 ntBASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 AC074198.2-201ENST00000508153 258 ntBASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 MIR3609-201ENST00000582661 80 ntBASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 AC072026.1-201ENST00000605023 201 ntBASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.22□□□□□ -1.73
SNX29Q8TEQ0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms