Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 TRAV32-201ENST00000553993 340 ntBASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 MIR3976-201ENST00000606807 139 ntBASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 MIR622-201ENST00000638396 96 ntBASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 AC005183.1-201ENST00000603687 1979 ntBASIC3.72□□□□□ -1.81
SH3RF3Q8TEJ3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
SH3RF3Q8TEJ3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 Y_RNA.111-201ENST00000363248 100 ntBASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 RNU6-1155P-201ENST00000363554 107 ntBASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 RN7SKP220-201ENST00000410611 288 ntBASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 RPL21P90-201ENST00000415692 466 ntBASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 AC092423.1-201ENST00000430165 186 ntBASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 AC004866.2-201ENST00000438285 481 ntBASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 ACA59.1-201ENST00000515966 143 ntBASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 RNU7-200P-201ENST00000516105 62 ntBASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 AC024405.2-202ENST00000532731 184 ntBASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 AMZ2P1-203ENST00000565833 850 ntBASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 AC005951.2-201ENST00000576282 495 ntBASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 FAM60BP-201ENST00000578364 658 ntBASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 MIR5696-201ENST00000578474 85 ntBASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 MIR4425-201ENST00000580572 84 ntBASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 AL121917.1-203ENST00000605534 577 ntBASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 AL031601.2-202ENST00000622650 282 ntBASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 AC007496.3-201ENST00000624987 3443 ntBASIC3.71□□□□□ -1.82
SH3RF3Q8TEJ3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 AC091152.2-201ENST00000591628 2569 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 Y_RNA.122-201ENST00000363331 96 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 RNU6-595P-201ENST00000363944 107 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 RNU1-140P-201ENST00000365040 165 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 RPS29P13-201ENST00000402041 169 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 AL591034.2-201ENST00000402839 359 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 HMGN2P20-201ENST00000437531 273 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 RN7SL330P-201ENST00000469709 307 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 RNU6-1278P-201ENST00000516130 107 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 MTND5P41-201ENST00000517498 206 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 AC022559.1-201ENST00000520905 205 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 AC011602.1-201ENST00000546484 331 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 CR383656.7-201ENST00000548164 174 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 LARP7P3-201ENST00000579888 337 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 LRRC37A5P-203ENST00000580181 585 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 AL590240.4-201ENST00000616908 390 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 AL365265.1-201ENST00000621045 234 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 Z75746.1-201ENST00000440243 2080 ntBASIC3.7□□□□□ -1.82
SH3RF3Q8TEJ3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 AC118273.1-201ENST00000525324 3006 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 Y_RNA.27-201ENST00000362540 103 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 SNORA80A-201ENST00000363922 136 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 RNU6-1317P-201ENST00000364582 104 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 RNU6-47P-201ENST00000383866 107 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 MIR578-201ENST00000384828 96 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 MIR628-201ENST00000385229 95 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 RN7SKP51-201ENST00000410781 304 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 RNU6-607P-201ENST00000411283 108 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 AC092573.2-201ENST00000434546 243 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 SNORA59A-201ENST00000459326 152 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 AC087190.1-201ENST00000484462 480 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 AC107032.1-201ENST00000485945 480 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 SERF1AP1-201ENST00000514575 187 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 SNORA31.3-201ENST00000516029 96 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 RNU6-677P-201ENST00000516914 101 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 AC069113.1-201ENST00000517763 267 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 OR1M4P-201ENST00000589199 287 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 AC008962.1-201ENST00000605729 304 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 MIR15A-201ENST00000607334 83 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 U2.14-201ENST00000615943 113 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 MIR376A1-201ENST00000616574 68 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 U6.98-201ENST00000637157 84 ntBASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SH3RF3Q8TEJ3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms