Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 Y_RNA.331-201ENST00000365267 102 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 RNA5SP240-201ENST00000365355 128 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 Y_RNA.383-201ENST00000383855 97 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 RNU6-213P-201ENST00000384051 104 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 RNU1-13P-201ENST00000384499 162 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 SNORA46.1-201ENST00000391069 153 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 RNA5SP171-201ENST00000391071 115 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 SNORA26.3-201ENST00000391119 136 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP43Q8NFH3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP43Q8NFH3 AL606753.1-201ENST00000427435 87 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 AC078809.1-201ENST00000427601 140 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP43Q8NFH3 TMSB4XP3-201ENST00000445144 114 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 Y_RNA.662-201ENST00000516028 97 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 RNA5SP468-201ENST00000516782 93 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.61□□□□□ -1.83
NUP43Q8NFH3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.61□□□□□ -1.83
NUP43Q8NFH3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP43Q8NFH3 AC090877.1-201ENST00000561418 344 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NUP43Q8NFH3 AC055872.1-201ENST00000570978 278 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 AC005176.2-201ENST00000596933 147 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP43Q8NFH3 MIR486-1-201ENST00000612171 68 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 MIR6075-201ENST00000620782 95 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 AC008725.1-201ENST00000605123 2263 ntBASIC3.61□□□□□ -1.83
NUP43Q8NFH3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NUP43Q8NFH3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.61□□□□□ -1.83
NUP43Q8NFH3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
NUP43Q8NFH3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NUP43Q8NFH3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NUP43Q8NFH3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
NUP43Q8NFH3 AC073073.2-201ENST00000609827 2578 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NUP43Q8NFH3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NUP43Q8NFH3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
NUP43Q8NFH3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
NUP43Q8NFH3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.6□□□□□ -1.83
NUP43Q8NFH3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NUP43Q8NFH3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
NUP43Q8NFH3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.6□□□□□ -1.83
NUP43Q8NFH3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NUP43Q8NFH3 AC092268.1-201ENST00000342691 405 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 RNU6-50P-201ENST00000362356 103 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 RNU6-1280P-201ENST00000365211 107 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 MIR199A2-201ENST00000385289 110 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 RPS26P42-201ENST00000413485 326 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 AC138623.1-201ENST00000418060 216 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 YPEL5P1-201ENST00000419731 367 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 AL117339.2-201ENST00000430475 180 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP43Q8NFH3 AC244670.1-201ENST00000436879 112 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 SETP5-201ENST00000437270 562 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 POLR2KP2-201ENST00000438155 177 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 AC010095.1-201ENST00000443543 144 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 HMGN2P10-201ENST00000448085 265 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 AP001324.2-201ENST00000461163 319 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 TRBV12-2-201ENST00000489763 344 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.6□□□□□ -1.83
NUP43Q8NFH3 RNU6-581P-201ENST00000516214 105 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 RNU6-966P-201ENST00000516479 104 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 SNORA67.7-201ENST00000516664 135 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 RN7SKP289-201ENST00000517244 295 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 AC021231.3-201ENST00000558497 370 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 AL360157.1-201ENST00000565962 87 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 AC009163.5-201ENST00000575421 637 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP43Q8NFH3 AC006133.1-201ENST00000617106 264 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 AC006001.4-201ENST00000622243 395 ntBASIC3.6□□□□□ -1.83
NUP43Q8NFH3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
NUP43Q8NFH3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.6□□□□□ -1.83
NUP43Q8NFH3 AL359854.1-201ENST00000614203 1594 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
NUP43Q8NFH3 AL109809.4-201ENST00000603520 2185 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.59□□□□□ -1.83
NUP43Q8NFH3 MIR372-201ENST00000362225 67 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 RNU6-1285P-201ENST00000363480 105 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 RNU6-270P-201ENST00000364131 105 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 SNORA62.3-201ENST00000365110 153 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 RNU1-89P-201ENST00000384592 164 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NUP43Q8NFH3 SNORA11.1-201ENST00000408133 129 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 RNA5SP129-201ENST00000410276 118 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 RN7SKP202-201ENST00000410439 330 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 RNU6-628P-201ENST00000410675 107 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 AC009237.7-201ENST00000447357 229 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 UQCRBP2-201ENST00000447827 297 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 AC007395.1-201ENST00000451333 677 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.59□□□□□ -1.83
NUP43Q8NFH3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.59□□□□□ -1.83
NUP43Q8NFH3 RNU7-200P-201ENST00000516105 62 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 RNY3P16-201ENST00000516338 101 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 RNU6-928P-201ENST00000516876 104 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.59□□□□□ -1.83
NUP43Q8NFH3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NUP43Q8NFH3 MIR3158-1-201ENST00000583596 81 ntBASIC3.59□□□□□ -1.83
NUP43Q8NFH3 AL078605.1-201ENST00000603529 500 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms