Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SNORA4.3-201ENST00000365564 137 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 SNORA8.3-201ENST00000384679 139 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 MIR186-201ENST00000384988 86 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 UBE2FP1-201ENST00000416536 447 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC092648.1-201ENST00000425870 423 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC244023.1-201ENST00000426884 112 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 SNRPEP8-201ENST00000442866 260 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 GXYLT1P1-201ENST00000446657 490 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AP003034.1-201ENST00000534621 422 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AL133153.1-201ENST00000557756 303 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC242498.1-201ENST00000604134 111 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC092574.1-201ENST00000609771 420 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RMST_4.1-201ENST00000616886 107 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC243994.1-201ENST00000618627 109 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC012676.2-201ENST00000619258 186 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC010615.1-201ENST00000594254 1764 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RNA5SP499-201ENST00000363982 119 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RNU6-621P-201ENST00000364752 109 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 SNORA25.8-201ENST00000364831 128 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.548-201ENST00000384656 105 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RNU2-39P-201ENST00000410604 198 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RNU4-22P-201ENST00000411058 166 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC096920.1-201ENST00000423991 241 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RNU6-351P-201ENST00000516097 100 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RNU7-51P-201ENST00000516560 62 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 DEFB131D-201ENST00000526803 184 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC103996.1-201ENST00000555468 102 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 MIR3912-201ENST00000577566 105 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 HMGN1P30-201ENST00000589286 268 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 CLIC4P2-201ENST00000601934 717 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AL358072.1-201ENST00000604156 575 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AL356157.2-201ENST00000605122 111 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC018889.1-201ENST00000605372 397 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AL359547.2-201ENST00000615810 418 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC073343.1-201ENST00000328239 651 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 MIR424-201ENST00000362227 98 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RNU6-338P-201ENST00000383888 105 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 MIR10A-201ENST00000385043 110 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC068533.2-201ENST00000411872 306 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 MTCO2P1-201ENST00000424648 477 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RPF2P2-201ENST00000504693 896 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RNU6-677P-201ENST00000516914 101 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC011979.2-201ENST00000527568 352 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC022616.8-201ENST00000533569 253 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC079148.1-201ENST00000565944 819 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC002400.1-201ENST00000569310 726 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 MIR4493-201ENST00000584016 73 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AF038458.1-201ENST00000588406 262 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RNU6-462P-201ENST00000362659 105 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RNU6-413P-201ENST00000384115 107 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 MIR329-2-201ENST00000385029 84 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC244670.1-201ENST00000436879 112 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RPL30P7-201ENST00000479312 323 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RNU6-1003P-201ENST00000517099 105 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AL512310.8-201ENST00000550183 120 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC005786.1-201ENST00000588553 154 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AC091057.3-201ENST00000602684 733 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 AP002802.2-201ENST00000605877 235 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.21□□□□□ -2.38
SYNE1Q8NF91 RNU6-438P-201ENST00000365561 103 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 MIR146A-201ENST00000385201 99 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 SNORD60.2-201ENST00000516883 86 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AL356057.1-201ENST00000533798 831 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 MIR3937-201ENST00000580135 106 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 MIR5692A1-201ENST00000580523 69 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 U4.2-201ENST00000618561 85 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 uc_338.22-201ENST00000622722 187 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 SUGT1P1-201ENST00000379514 476 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 CBX3P9-201ENST00000402326 552 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.623-201ENST00000411128 95 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.2□□□□□ -2.38
SYNE1Q8NF91 AC024589.1-201ENST00000512207 263 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 RNA5SP404-201ENST00000517118 132 ntBASIC0.2□□□□□ -2.38
SYNE1Q8NF91 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms