Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 RNY3P3-201ENST00000363816 102 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 RNA5SP68-201ENST00000363885 119 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 RNU6-1090P-201ENST00000364065 94 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 RNU6-43P-201ENST00000384302 107 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 RNU6-1274P-201ENST00000384557 107 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 Y_RNA.554-201ENST00000384672 102 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 RNU6-1245P-201ENST00000411130 106 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 C8orf59P1-201ENST00000429930 303 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 ERLEC1P1-201ENST00000433806 578 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 AC124916.1-201ENST00000444020 547 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 BX510359.1-201ENST00000456973 237 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 SNORA19.2-201ENST00000516013 114 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 RNU5F-2P-201ENST00000516066 82 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 RN7SKP256-201ENST00000517201 314 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 MIR5692C1-201ENST00000585309 91 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 AC010525.2-201ENST00000590920 195 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 BNIP3P25-201ENST00000596023 559 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 AL121757.2-201ENST00000611223 313 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 DISC2.1-201ENST00000612827 205 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 MIR8057-201ENST00000620957 69 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 AC139792.2-201ENST00000624218 587 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 AC121333.1-201ENST00000567488 2709 ntBASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 Y_RNA.38-201ENST00000362617 102 ntBASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 U3.12-201ENST00000364498 214 ntBASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 SNORA16B-201ENST00000364674 135 ntBASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 U3.13-201ENST00000364804 214 ntBASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 SNORD32A-201ENST00000364805 84 ntBASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 U3.40-201ENST00000408706 208 ntBASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 RNA5SP489-201ENST00000410986 109 ntBASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 AL356379.1-201ENST00000414105 126 ntBASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 MTCO1P20-201ENST00000425366 358 ntBASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 MTCO2P3-201ENST00000442543 421 ntBASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 RPS27P21-201ENST00000486977 252 ntBASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 RN7SKP132-201ENST00000516001 208 ntBASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 AC109635.3-201ENST00000529536 185 ntBASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC197Q8NCU1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 RNU6-1141P-201ENST00000364520 107 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 Y_RNA.256-201ENST00000364594 104 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 RN7SKP158-201ENST00000410453 326 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 AL030996.1-201ENST00000411430 235 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 USP9YP18-201ENST00000425912 695 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 RPL23AP95-201ENST00000426806 265 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 AC009238.1-201ENST00000442165 424 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 AC009237.6-201ENST00000446969 424 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 Y_RNA.665-201ENST00000516177 98 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 RNU7-193P-201ENST00000516723 65 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 AC087854.1-201ENST00000519706 414 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 RNU6-323P-201ENST00000521915 107 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 AC115990.1-201ENST00000526957 301 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 CYCSP26-201ENST00000534107 320 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 ZNF519P2-201ENST00000557032 169 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 SRGNP1-201ENST00000603392 451 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 AL670379.2-201ENST00000604983 252 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 U4.5-201ENST00000617137 123 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 AC090517.3-201ENST00000625170 141 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 CENPCP1-201ENST00000533085 2578 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 KPNA2P1-201ENST00000458289 1591 ntBASIC2.05□□□□□ -2.08
CCDC197Q8NCU1 AL359851.1-201ENST00000569460 4997 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 Y_RNA.9-201ENST00000362354 101 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 snoU2_19.1-201ENST00000362361 80 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 RNU6-944P-201ENST00000364023 107 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 SNORA25B-201ENST00000365507 128 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 Y_RNA.402-201ENST00000383972 102 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 RNU6-1215P-201ENST00000384441 102 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 MIR29B2-201ENST00000385055 81 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 MIR561-201ENST00000385216 97 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 EIF4E2P1-201ENST00000393781 255 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 MRPS10P2-201ENST00000431226 381 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 RPS15AP10-201ENST00000432472 382 ntBASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC197Q8NCU1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms