Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC110079.1-202ENST00000635213 138 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 MIR1302-1-201ENST00000637932 143 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 HAUS6P2-201ENST00000433254 2404 ntBASIC2.94□□□□□ -1.94
VPS52Q8N1B4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS52Q8N1B4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS52Q8N1B4 AC092593.1-201ENST00000515413 1815 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VPS52Q8N1B4 SNORD62.1-201ENST00000362541 86 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 RNU6-428P-201ENST00000362942 107 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 RNA5SP68-201ENST00000363885 119 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 RNU6-593P-201ENST00000364716 112 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 RNU6-336P-201ENST00000364891 107 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 AL030996.1-201ENST00000411430 235 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 PTGES3P4-201ENST00000426243 356 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 MTND3P23-201ENST00000431980 347 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 RPS15AP10-201ENST00000432472 382 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 AL513328.1-201ENST00000446460 224 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS52Q8N1B4 RNU7-187P-201ENST00000458985 68 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 MTND4P17-201ENST00000470444 350 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 MED28P2-201ENST00000475771 317 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 AC103975.1-201ENST00000482506 483 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS52Q8N1B4 RPL39P5-202ENST00000512505 151 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.93□□□□□ -1.94
VPS52Q8N1B4 RN7SKP24-201ENST00000515888 284 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 ELOCP31-201ENST00000540463 467 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS52Q8N1B4 AC103996.1-201ENST00000555468 102 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS52Q8N1B4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS52Q8N1B4 AC008739.2-201ENST00000597006 317 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 MIR6817-201ENST00000615588 66 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS52Q8N1B4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VPS52Q8N1B4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS52Q8N1B4 AC135776.4-201ENST00000624300 1904 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 Z82195.2-201ENST00000612348 18351 ntBASIC2.93□□□□□ -1.94
VPS52Q8N1B4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS52Q8N1B4 MTND4P23-201ENST00000447723 1363 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.92□□□□□ -1.94
VPS52Q8N1B4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.92□□□□□ -1.94
VPS52Q8N1B4 RNU6-487P-201ENST00000365430 104 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 RNU6-843P-201ENST00000384454 104 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 RNU6-748P-201ENST00000384648 107 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 RNU6-1106P-201ENST00000390845 107 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VPS52Q8N1B4 RPL37P10-201ENST00000412884 288 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 SUMO1P4-201ENST00000429430 302 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS52Q8N1B4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS52Q8N1B4 Y_RNA.635-201ENST00000459041 101 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 AC008571.1-201ENST00000467232 300 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 TRBV12-1-201ENST00000479785 344 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 AIG1P1-201ENST00000503376 148 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 AC116337.1-201ENST00000509680 687 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS52Q8N1B4 AC093027.1-201ENST00000546698 429 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 AL355375.2-201ENST00000574825 175 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 ZNF861P-201ENST00000588126 639 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 AL133215.3-201ENST00000609801 448 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 AL161423.1-201ENST00000613700 262 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 AC098657.3-201ENST00000620434 263 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 FO624990.1-201ENST00000636373 85 ntBASIC2.92□□□□□ -1.94
VPS52Q8N1B4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.91□□□□□ -1.94
VPS52Q8N1B4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
VPS52Q8N1B4 Y_RNA.482-201ENST00000384377 111 ntBASIC2.91□□□□□ -1.94
VPS52Q8N1B4 SNORD116-20-201ENST00000384529 92 ntBASIC2.91□□□□□ -1.94
VPS52Q8N1B4 MIR767-201ENST00000390228 109 ntBASIC2.91□□□□□ -1.94
VPS52Q8N1B4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
VPS52Q8N1B4 RNU4-14P-201ENST00000410858 122 ntBASIC2.91□□□□□ -1.94
VPS52Q8N1B4 RNU6-293P-201ENST00000411259 106 ntBASIC2.91□□□□□ -1.94
VPS52Q8N1B4 AC074117.2-201ENST00000417130 397 ntBASIC2.91□□□□□ -1.94
VPS52Q8N1B4 AC009414.1-201ENST00000427200 443 ntBASIC2.91□□□□□ -1.94
VPS52Q8N1B4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.91□□□□□ -1.94
VPS52Q8N1B4 AC092427.1-202ENST00000430569 476 ntBASIC2.91□□□□□ -1.94
VPS52Q8N1B4 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.91□□□□□ -1.94
VPS52Q8N1B4 AC096725.1-201ENST00000514266 313 ntBASIC2.91□□□□□ -1.94
VPS52Q8N1B4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.91□□□□□ -1.94
VPS52Q8N1B4 SNORA9.3-201ENST00000516383 129 ntBASIC2.91□□□□□ -1.94
VPS52Q8N1B4 SNORA31.23-201ENST00000517219 133 ntBASIC2.91□□□□□ -1.94
VPS52Q8N1B4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.91□□□□□ -1.94
VPS52Q8N1B4 AC104984.5-201ENST00000586878 94 ntBASIC2.91□□□□□ -1.94
VPS52Q8N1B4 BNIP3P16-201ENST00000589779 534 ntBASIC2.91□□□□□ -1.94
VPS52Q8N1B4 AC016727.1-205ENST00000605437 569 ntBASIC2.91□□□□□ -1.94
VPS52Q8N1B4 MIR6715A-201ENST00000615929 79 ntBASIC2.91□□□□□ -1.94
VPS52Q8N1B4 AC244517.12-201ENST00000623581 663 ntBASIC2.91□□□□□ -1.94
VPS52Q8N1B4 MIR3529-201ENST00000637713 78 ntBASIC2.91□□□□□ -1.94
VPS52Q8N1B4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
VPS52Q8N1B4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
VPS52Q8N1B4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
VPS52Q8N1B4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
VPS52Q8N1B4 RNU4-79P-201ENST00000362764 141 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 XGY1-201ENST00000381172 446 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 Y_RNA.387-201ENST00000383918 102 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 RNU6-19P-201ENST00000384718 107 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 AL356057.3-201ENST00000402607 340 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 AL139095.1-201ENST00000404326 391 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 RNU6-325P-201ENST00000411132 105 ntBASIC2.9□□□□□ -1.95
VPS52Q8N1B4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms