Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.28□□□□□ -1.88
CHPFQ8IZ52 ACA59.1-201ENST00000515966 143 ntBASIC3.28□□□□□ -1.88
CHPFQ8IZ52 RPPH1-2P-201ENST00000516688 293 ntBASIC3.28□□□□□ -1.88
CHPFQ8IZ52 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.28□□□□□ -1.88
CHPFQ8IZ52 AC022080.3-201ENST00000544433 482 ntBASIC3.28□□□□□ -1.88
CHPFQ8IZ52 HSPE1P4-201ENST00000550617 308 ntBASIC3.28□□□□□ -1.88
CHPFQ8IZ52 MIR5690-201ENST00000583739 73 ntBASIC3.28□□□□□ -1.88
CHPFQ8IZ52 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.28□□□□□ -1.88
CHPFQ8IZ52 AC078795.3-201ENST00000602913 472 ntBASIC3.28□□□□□ -1.88
CHPFQ8IZ52 AL133255.1-201ENST00000606374 441 ntBASIC3.28□□□□□ -1.88
CHPFQ8IZ52 AC018692.3-201ENST00000623929 123 ntBASIC3.28□□□□□ -1.88
CHPFQ8IZ52 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.28□□□□□ -1.88
CHPFQ8IZ52 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
CHPFQ8IZ52 AP000560.1-201ENST00000624150 1937 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CHPFQ8IZ52 RNU6-1210P-201ENST00000363775 107 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 U3.13-201ENST00000364804 214 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CHPFQ8IZ52 RN7SKP61-201ENST00000410642 295 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 AC245054.2-201ENST00000415639 319 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 COTL1P1-201ENST00000422309 375 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 AL133396.1-201ENST00000432048 687 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 AC244670.1-201ENST00000436879 112 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.27□□□□□ -1.89
CHPFQ8IZ52 AC073901.1-201ENST00000462471 408 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 CENPBD1P1-201ENST00000464061 469 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 AC016632.1-201ENST00000503994 196 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 PTP4A1P4-201ENST00000512479 322 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 Y_RNA.701-201ENST00000516812 110 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 Y_RNA.718-201ENST00000517110 102 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 AC104027.1-201ENST00000521887 300 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 AP002404.1-201ENST00000532005 451 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 APOOP3-201ENST00000536787 586 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 LARP7P3-201ENST00000579888 337 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.27□□□□□ -1.89
CHPFQ8IZ52 MIR3976-201ENST00000606807 139 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 AC006386.2-201ENST00000624491 75 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 AC012005.1-201ENST00000624575 75 ntBASIC3.27□□□□□ -1.89
CHPFQ8IZ52 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHPFQ8IZ52 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHPFQ8IZ52 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHPFQ8IZ52 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CHPFQ8IZ52 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHPFQ8IZ52 Y_RNA.40-201ENST00000362645 93 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 U8.8-201ENST00000365399 135 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 RNU6-142P-201ENST00000384019 107 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 RNU6-306P-201ENST00000384617 107 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 AC008267.5-201ENST00000424928 265 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 RPL23AP22-201ENST00000437556 453 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.26□□□□□ -1.89
CHPFQ8IZ52 AC008571.1-201ENST00000467232 300 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 AL121594.1-201ENST00000475906 575 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 AC140059.1-201ENST00000489238 361 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 AIG1P1-201ENST00000503376 148 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 AC022447.4-201ENST00000504053 364 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
CHPFQ8IZ52 RNU6-1016P-201ENST00000516689 94 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 AC007375.1-201ENST00000554513 578 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 EIF4BP1-201ENST00000554881 351 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.26□□□□□ -1.89
CHPFQ8IZ52 RPL30P11-203ENST00000598995 310 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 AL353621.2-201ENST00000605340 133 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 RPL23AP88-201ENST00000605759 454 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 MTND5P27-201ENST00000428871 1720 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.26□□□□□ -1.89
CHPFQ8IZ52 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHPFQ8IZ52 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.25□□□□□ -1.89
CHPFQ8IZ52 AC092268.1-201ENST00000342691 405 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 U3.6-201ENST00000363622 211 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 Y_RNA.315-201ENST00000365117 102 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 SNORD116-29-201ENST00000384516 83 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 RNY4P36-201ENST00000391116 96 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 MTCYBP4-201ENST00000401524 249 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 CBX3P9-201ENST00000402326 552 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 SNORA11.2-201ENST00000408318 127 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 EIF1AXP1-201ENST00000419267 435 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 AIMP1P2-201ENST00000425294 312 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.25□□□□□ -1.89
CHPFQ8IZ52 EEF1B2P7-201ENST00000451177 676 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.25□□□□□ -1.89
CHPFQ8IZ52 AC104564.1-201ENST00000493028 407 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.25□□□□□ -1.89
CHPFQ8IZ52 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 RNU6-1153P-201ENST00000516760 105 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 RNA5SP380-201ENST00000517190 98 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.25□□□□□ -1.89
CHPFQ8IZ52 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.25□□□□□ -1.89
CHPFQ8IZ52 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.25□□□□□ -1.89
CHPFQ8IZ52 MIR2682-201ENST00000580305 110 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.25□□□□□ -1.89
CHPFQ8IZ52 AC090616.3-201ENST00000582184 217 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 PISRT1.1-201ENST00000616930 107 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 AL449363.1-201ENST00000617815 186 ntBASIC3.25□□□□□ -1.89
CHPFQ8IZ52 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.25□□□□□ -1.89
CHPFQ8IZ52 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CHPFQ8IZ52 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CHPFQ8IZ52 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms