Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.56□□□□□ -2.16
CDKL3Q8IVW4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 RNU6-1287P-201ENST00000362914 107 ntBASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 U3.4-201ENST00000363352 213 ntBASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 RNU6-1060P-201ENST00000384664 107 ntBASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 RNU6-550P-201ENST00000391057 101 ntBASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 RAP1BP3-201ENST00000407180 549 ntBASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 RNU2-48P-201ENST00000410694 191 ntBASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 RNU6-248P-201ENST00000410720 107 ntBASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 EIF4EP2-201ENST00000422816 654 ntBASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 MTND2P4-201ENST00000445034 1004 ntBASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 AC245102.2-201ENST00000448956 180 ntBASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 AP003072.2-201ENST00000527756 676 ntBASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 RMST_4.1-201ENST00000616886 107 ntBASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 RMST_7.1-201ENST00000621935 268 ntBASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 AC011155.2-201ENST00000623202 216 ntBASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CDKL3Q8IVW4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 RNU6-655P-201ENST00000362858 107 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 SNORD56.1-201ENST00000362913 68 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 RNU6-1097P-201ENST00000363586 107 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 Y_RNA.201-201ENST00000364052 96 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 RNU4-91P-201ENST00000364778 135 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 RNU6-108P-201ENST00000365558 107 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 MIR1-2-201ENST00000384961 85 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 MIR454-201ENST00000390180 115 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 MIR1323-201ENST00000408090 73 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 RNU2-3P-201ENST00000410144 191 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 RNU2-23P-201ENST00000410545 195 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 BX295541.1-201ENST00000417774 250 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 AL513185.2-201ENST00000425543 193 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 AC092447.3-201ENST00000426027 686 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 AL162395.1-201ENST00000457882 422 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 AL121594.1-201ENST00000475906 575 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 AC021146.2-201ENST00000504736 556 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 MTCO3P9-201ENST00000506989 781 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 SNORD27.1-201ENST00000516319 72 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 SNORA44.1-201ENST00000517031 108 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 CYCSP27-201ENST00000527643 293 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 SNORD53B-201ENST00000577887 78 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 AC245014.2-201ENST00000603689 287 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 Z84480.1-201ENST00000605131 311 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 AC246785.4-201ENST00000605374 287 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 AC090517.3-201ENST00000625170 141 ntBASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.54□□□□□ -2.16
CDKL3Q8IVW4 RNU6-212P-201ENST00000362642 104 ntBASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 RNU6-78P-201ENST00000362897 107 ntBASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 RNA5SP190-201ENST00000365222 118 ntBASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 RNU6-282P-201ENST00000365357 103 ntBASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 RNU6-611P-201ENST00000384276 104 ntBASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 RNU6-45P-201ENST00000384471 107 ntBASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 AL049545.1-201ENST00000401856 572 ntBASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 RNA5SP390-201ENST00000410191 113 ntBASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 RNU6-607P-201ENST00000411283 108 ntBASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 FAM206BP-201ENST00000510179 541 ntBASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 AC074344.1-201ENST00000512823 224 ntBASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 MTCO3P28-201ENST00000513351 515 ntBASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 MIR4775-201ENST00000581168 75 ntBASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 AL670379.2-201ENST00000604983 252 ntBASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 AC016925.2-201ENST00000605108 242 ntBASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 AC016727.1-205ENST00000605437 569 ntBASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 SEPT14P19-203ENST00000633205 211 ntBASIC1.53□□□□□ -2.16
CDKL3Q8IVW4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 RNU6-1210P-201ENST00000363775 107 ntBASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 RNU6-715P-201ENST00000365204 103 ntBASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 RNU5E-7P-201ENST00000365290 117 ntBASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 RNU6-1274P-201ENST00000384557 107 ntBASIC1.52□□□□□ -2.17
CDKL3Q8IVW4 SNORA67.6-201ENST00000391093 99 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 252.3 ms