Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC012306.1-201ENST00000423267 114 ntBASIC4.23□□□□□ -1.73
NPAS4Q8IUM7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
NPAS4Q8IUM7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.23□□□□□ -1.73
NPAS4Q8IUM7 AC026726.1-201ENST00000512859 601 ntBASIC4.23□□□□□ -1.73
NPAS4Q8IUM7 SCARNA14-201ENST00000516903 136 ntBASIC4.23□□□□□ -1.73
NPAS4Q8IUM7 RNU6-1212P-201ENST00000517023 104 ntBASIC4.23□□□□□ -1.73
NPAS4Q8IUM7 AC087441.2-201ENST00000529141 262 ntBASIC4.23□□□□□ -1.73
NPAS4Q8IUM7 CBX3P4-201ENST00000538909 354 ntBASIC4.23□□□□□ -1.73
NPAS4Q8IUM7 AC073657.2-201ENST00000605661 303 ntBASIC4.23□□□□□ -1.73
NPAS4Q8IUM7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.23□□□□□ -1.73
NPAS4Q8IUM7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.23□□□□□ -1.73
NPAS4Q8IUM7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 Y_RNA.199-201ENST00000364014 102 ntBASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 RNU6-378P-201ENST00000384324 107 ntBASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 SNORD78.2-201ENST00000391076 69 ntBASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 RNU1-139P-201ENST00000391307 165 ntBASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 RPS26P42-201ENST00000413485 326 ntBASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 AL139247.1-201ENST00000422768 325 ntBASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 AC017083.1-201ENST00000428093 483 ntBASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 U8.22-201ENST00000459141 133 ntBASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 RPS23P5-201ENST00000495419 428 ntBASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 AIG1P1-201ENST00000503376 148 ntBASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 AP002770.2-201ENST00000543613 532 ntBASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 MIR4644-201ENST00000579929 84 ntBASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 AL713866.2-201ENST00000603579 219 ntBASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 SNORD98-201ENST00000636377 67 ntBASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
NPAS4Q8IUM7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.21□□□□□ -1.73
NPAS4Q8IUM7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
NPAS4Q8IUM7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
NPAS4Q8IUM7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 MIR320B2-201ENST00000408479 138 ntBASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 SNORA3C-201ENST00000408792 125 ntBASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 RNU6-1140P-201ENST00000410517 106 ntBASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 AC083863.1-201ENST00000438811 231 ntBASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 Y_RNA.683-201ENST00000516508 93 ntBASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 RNA5SP54-201ENST00000516951 92 ntBASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 AC024405.2-202ENST00000532731 184 ntBASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 AP002392.1-201ENST00000537692 208 ntBASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 AC023824.2-201ENST00000566185 400 ntBASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 AC007179.3-201ENST00000604976 235 ntBASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.21□□□□□ -1.74
NPAS4Q8IUM7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 MIR411-201ENST00000362239 96 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 RNA5SP240-201ENST00000365355 128 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 RNU6-937P-201ENST00000384325 106 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 Y_RNA.581-201ENST00000391017 97 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 AL079342.1-201ENST00000401460 267 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 AL133475.1-201ENST00000404414 305 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 AL035423.1-201ENST00000420331 213 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 AL358075.3-201ENST00000426289 226 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 HMGN2P31-201ENST00000432430 273 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 HMGB1P37-201ENST00000439613 609 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 RNU7-120P-201ENST00000459334 63 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 AP001324.2-201ENST00000461163 319 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 AC090525.1-201ENST00000479116 478 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 AC006517.1-201ENST00000480485 328 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 AC074198.2-201ENST00000508153 258 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 SNORA25.14-201ENST00000516481 132 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 GNRHR2P1-201ENST00000555315 631 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 MIR5187-201ENST00000583479 76 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 AL161756.2-201ENST00000604597 246 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 Y_RNA.772-201ENST00000606692 102 ntBASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NPAS4Q8IUM7 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 RNU6-222P-201ENST00000362438 107 ntBASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 Y_RNA.76-201ENST00000362931 109 ntBASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 SNORD113-8-201ENST00000363497 74 ntBASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 RNU6-682P-201ENST00000363843 106 ntBASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 RNU6-879P-201ENST00000364328 108 ntBASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 RNU6-102P-201ENST00000384485 104 ntBASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 MIR34B-201ENST00000385076 84 ntBASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 RPS29P4-201ENST00000414733 161 ntBASIC4.19□□□□□ -1.74
NPAS4Q8IUM7 COX6CP10-201ENST00000416832 224 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms