Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 MTATP6P7-201ENST00000453315 681 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 BTF3P15-201ENST00000455606 336 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 RPL26P9-201ENST00000457466 433 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 SNORD5.1-201ENST00000458800 75 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 Y_RNA.631-201ENST00000459607 101 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 AP001486.1-201ENST00000463339 476 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 FO393415.2-201ENST00000480085 343 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 PTP4A1P4-201ENST00000512479 322 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 RNU6-377P-201ENST00000515965 102 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 RNU6-581P-201ENST00000516214 105 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 AC107016.2-201ENST00000547968 190 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 AC009314.1-201ENST00000603871 304 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 Y_RNA.812-201ENST00000610788 101 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 Y_RNA.784-201ENST00000613803 101 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 Y_RNA.787-201ENST00000616522 101 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 Y_RNA.780-201ENST00000617336 101 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 Y_RNA.801-201ENST00000619005 101 ntBASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RAB11FIP4Q86YS3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 MTND5P10-201ENST00000603719 1809 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 RNU6-78P-201ENST00000362897 107 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 RNU5E-7P-201ENST00000365290 117 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 RNU2-52P-201ENST00000410680 190 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 AL117339.3-201ENST00000418733 162 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 RPL23AP50-201ENST00000434149 455 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 RNU6-1037P-201ENST00000459571 107 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 RPS29P12-201ENST00000460178 152 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 AC103975.1-201ENST00000482506 483 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 RNA5SP367-201ENST00000516557 118 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 RNU6-56P-201ENST00000516986 93 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 ELOCP31-201ENST00000540463 467 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 GTF3AP2-201ENST00000557014 266 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 AC109446.1-201ENST00000566172 220 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 RPL23AP78-201ENST00000599928 470 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 SNRPGP17-201ENST00000603780 214 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 AC040896.1-201ENST00000613819 479 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 uc_338.22-201ENST00000622722 187 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 MTND4P27-201ENST00000450813 1354 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.19□□□□□ -1.9
RAB11FIP4Q86YS3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 RNU1-105P-201ENST00000363470 161 ntBASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 MIR521-1-201ENST00000384902 87 ntBASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 U3.37-201ENST00000408528 213 ntBASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 BX276092.3-201ENST00000424182 230 ntBASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 AL133396.1-201ENST00000432048 687 ntBASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 AC105272.1-201ENST00000438604 198 ntBASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 RPL23AP58-201ENST00000440453 469 ntBASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 NACAP3-201ENST00000552100 481 ntBASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 AC107871.2-201ENST00000612894 502 ntBASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 AC110079.1-202ENST00000635213 138 ntBASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RAB11FIP4Q86YS3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 MTND5P30-201ENST00000452896 1731 ntBASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 RNU6-933P-201ENST00000384424 107 ntBASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 AL513475.1-201ENST00000406602 315 ntBASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 MTND3P9-201ENST00000429526 346 ntBASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 HIGD1AP2-201ENST00000446367 280 ntBASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 AL049873.1-201ENST00000480540 376 ntBASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 AL163540.1-201ENST00000485382 386 ntBASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 AL442663.2-201ENST00000554385 511 ntBASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 CPDP1-201ENST00000579660 283 ntBASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 U4.7-201ENST00000638126 106 ntBASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.17□□□□□ -1.9
RAB11FIP4Q86YS3 AC004944.1-201ENST00000517807 3059 ntBASIC3.16□□□□□ -1.9
RAB11FIP4Q86YS3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
RAB11FIP4Q86YS3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RAB11FIP4Q86YS3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RAB11FIP4Q86YS3 RNU6-942P-201ENST00000363002 107 ntBASIC3.16□□□□□ -1.9
RAB11FIP4Q86YS3 Y_RNA.162-201ENST00000363683 102 ntBASIC3.16□□□□□ -1.9
RAB11FIP4Q86YS3 RNU6-336P-201ENST00000364891 107 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms