Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATG4DQ86TL0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ATG4DQ86TL0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ATG4DQ86TL0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
ATG4DQ86TL0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.7□□□□□ -1.82
ATG4DQ86TL0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATG4DQ86TL0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ATG4DQ86TL0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATG4DQ86TL0 SNORD56.1-201ENST00000362913 68 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 RNU6-942P-201ENST00000363002 107 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 RNA5SP130-201ENST00000364431 114 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 RNU6-407P-201ENST00000365280 104 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 Z98749.2-208ENST00000381646 500 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 SNORA57.1-201ENST00000391227 145 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 RNA5SP306-201ENST00000411087 107 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 AC009963.1-201ENST00000417265 157 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 AC069285.2-201ENST00000440210 275 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 AP000705.1-201ENST00000454567 350 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
ATG4DQ86TL0 RN7SL271P-201ENST00000487601 295 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 RNU5E-3P-201ENST00000515913 68 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 RNU6-168P-201ENST00000516189 101 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 RNU6-589P-201ENST00000516485 107 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 RNU6-1007P-201ENST00000516586 107 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 AP004607.1-201ENST00000524456 203 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ATG4DQ86TL0 HSPE1P4-201ENST00000550617 308 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 MIR5571-201ENST00000577998 113 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.7□□□□□ -1.82
ATG4DQ86TL0 AC005255.1-201ENST00000593748 216 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 AC090132.2-201ENST00000615881 347 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 AC024581.2-201ENST00000619986 252 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 MIR492-201ENST00000638676 116 ntBASIC3.7□□□□□ -1.82
ATG4DQ86TL0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.7□□□□□ -1.82
ATG4DQ86TL0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ATG4DQ86TL0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
ATG4DQ86TL0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
ATG4DQ86TL0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.7□□□□□ -1.82
ATG4DQ86TL0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
ATG4DQ86TL0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
ATG4DQ86TL0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
ATG4DQ86TL0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
ATG4DQ86TL0 ZNF702P-202ENST00000434269 1966 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ATG4DQ86TL0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ATG4DQ86TL0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
ATG4DQ86TL0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ATG4DQ86TL0 SNORA60-201ENST00000362396 134 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 RNU6-1285P-201ENST00000363480 105 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 SNORD35B-201ENST00000363660 87 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 Y_RNA.179-201ENST00000363844 90 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 Y_RNA.293-201ENST00000364908 93 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 RNU6-1180P-201ENST00000364935 107 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 Y_RNA.309-201ENST00000365046 111 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 RNA5SP283-201ENST00000365604 119 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 RNU6-629P-201ENST00000384061 103 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 MIR626-201ENST00000385032 94 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ATG4DQ86TL0 SNORA26.5-201ENST00000391215 123 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 AL512633.1-201ENST00000399931 655 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 RPL26P27-201ENST00000414397 437 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.69□□□□□ -1.82
ATG4DQ86TL0 RPL27AP8-201ENST00000424277 446 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 AL356867.1-201ENST00000429623 299 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 FTH1P6-201ENST00000430768 320 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.69□□□□□ -1.82
ATG4DQ86TL0 AL135790.2-201ENST00000437701 267 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 RPL31P61-201ENST00000496160 376 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 FCF1P8-201ENST00000510322 597 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 RN7SKP179-201ENST00000516126 217 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 AP001328.1-201ENST00000528550 176 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.69□□□□□ -1.82
ATG4DQ86TL0 AC106785.1-201ENST00000565935 262 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 AC025627.2-201ENST00000576220 160 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 AC023043.3-201ENST00000593113 385 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.69□□□□□ -1.82
ATG4DQ86TL0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.69□□□□□ -1.82
ATG4DQ86TL0 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 AC106871.1-201ENST00000568324 3102 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 AC016588.2-201ENST00000632484 3021 ntBASIC3.69□□□□□ -1.82
ATG4DQ86TL0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ATG4DQ86TL0 AC134026.1-201ENST00000623249 2239 ntBASIC3.68□□□□□ -1.82
ATG4DQ86TL0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4DQ86TL0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4DQ86TL0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.68□□□□□ -1.82
ATG4DQ86TL0 MAPK10-253ENST00000641010 4072 ntBASIC3.68□□□□□ -1.82
ATG4DQ86TL0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4DQ86TL0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.68□□□□□ -1.82
ATG4DQ86TL0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4DQ86TL0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATG4DQ86TL0 AL359693.1-201ENST00000614959 2407 ntBASIC3.68□□□□□ -1.82
ATG4DQ86TL0 Y_RNA.24-201ENST00000362508 103 ntBASIC3.68□□□□□ -1.82
ATG4DQ86TL0 RNU6-324P-201ENST00000363957 106 ntBASIC3.68□□□□□ -1.82
ATG4DQ86TL0 RNU6-1048P-201ENST00000364054 107 ntBASIC3.68□□□□□ -1.82
ATG4DQ86TL0 RNA5SP235-201ENST00000365411 114 ntBASIC3.68□□□□□ -1.82
ATG4DQ86TL0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.68□□□□□ -1.82
ATG4DQ86TL0 AL356095.1-201ENST00000417217 199 ntBASIC3.68□□□□□ -1.82
ATG4DQ86TL0 AC004552.1-201ENST00000419089 348 ntBASIC3.68□□□□□ -1.82
ATG4DQ86TL0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.68□□□□□ -1.82
ATG4DQ86TL0 RPS26P3-201ENST00000470205 348 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms