Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MTND2P33-201ENST00000506452 1031 ntBASIC0.1□□□□□ -2.39
CSMD3Q7Z407 SNORA25.11-201ENST00000515935 105 ntBASIC0.1□□□□□ -2.39
CSMD3Q7Z407 AC079598.5-201ENST00000547460 117 ntBASIC0.1□□□□□ -2.39
CSMD3Q7Z407 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.1□□□□□ -2.39
CSMD3Q7Z407 SNORA77B-201ENST00000578179 125 ntBASIC0.1□□□□□ -2.39
CSMD3Q7Z407 AC040896.1-201ENST00000613819 479 ntBASIC0.1□□□□□ -2.39
CSMD3Q7Z407 uc_338.17-201ENST00000619633 179 ntBASIC0.1□□□□□ -2.39
CSMD3Q7Z407 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.09□□□□□ -2.39
CSMD3Q7Z407 AC008267.5-201ENST00000424928 265 ntBASIC0.09□□□□□ -2.39
CSMD3Q7Z407 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.09□□□□□ -2.39
CSMD3Q7Z407 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.09□□□□□ -2.39
CSMD3Q7Z407 OR2AQ1P-201ENST00000451972 200 ntBASIC0.09□□□□□ -2.39
CSMD3Q7Z407 RNU6-333P-201ENST00000459117 107 ntBASIC0.09□□□□□ -2.39
CSMD3Q7Z407 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.09□□□□□ -2.39
CSMD3Q7Z407 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.09□□□□□ -2.39
CSMD3Q7Z407 AC093259.1-201ENST00000509755 300 ntBASIC0.09□□□□□ -2.39
CSMD3Q7Z407 PTP4A1P4-201ENST00000512479 322 ntBASIC0.09□□□□□ -2.39
CSMD3Q7Z407 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.09□□□□□ -2.39
CSMD3Q7Z407 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.09□□□□□ -2.39
CSMD3Q7Z407 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.09□□□□□ -2.39
CSMD3Q7Z407 U6.101-201ENST00000637707 76 ntBASIC0.09□□□□□ -2.39
CSMD3Q7Z407 RNU6-23P-201ENST00000363283 107 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 Y_RNA.413-201ENST00000384007 102 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 MIR938-201ENST00000401216 83 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 RPS26P5-201ENST00000418544 335 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.09□□□□□ -2.4
CSMD3Q7Z407 RNU1-131P-201ENST00000458943 161 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 AC010631.1-201ENST00000474150 156 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 Y_RNA.754-201ENST00000476024 102 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 RNU2-53P-201ENST00000516257 147 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 RNA5SP168-201ENST00000516642 112 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 RNA5SP135-201ENST00000517019 125 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 AC093012.1-202ENST00000549403 582 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.09□□□□□ -2.4
CSMD3Q7Z407 Y_RNA.790-201ENST00000614282 102 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 Y_RNA.782-201ENST00000614695 102 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 RNU6-858P-201ENST00000362436 107 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 MIR601-201ENST00000385256 79 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.09□□□□□ -2.4
CSMD3Q7Z407 PTGES3P1-201ENST00000439531 483 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 AC026371.1-201ENST00000551867 419 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 MIR4305-201ENST00000583252 102 ntBASIC0.09□□□□□ -2.4
CSMD3Q7Z407 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.09□□□□□ -2.4
CSMD3Q7Z407 RNU6-359P-201ENST00000365466 108 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
CSMD3Q7Z407 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.08□□□□□ -2.4
CSMD3Q7Z407 MTATP6P30-201ENST00000443540 664 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.08□□□□□ -2.4
CSMD3Q7Z407 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.08□□□□□ -2.4
CSMD3Q7Z407 AC048334.1-201ENST00000477975 159 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 RPL23AP54-201ENST00000495129 419 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 RNU6-197P-201ENST00000516680 100 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 AC022861.1-201ENST00000522981 663 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 IGKV1-22-201ENST00000524313 326 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.08□□□□□ -2.4
CSMD3Q7Z407 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.08□□□□□ -2.4
CSMD3Q7Z407 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.08□□□□□ -2.4
CSMD3Q7Z407 AL590229.1-201ENST00000603497 542 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.08□□□□□ -2.4
CSMD3Q7Z407 AC063976.4-201ENST00000421971 163 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 PSMA6P3-201ENST00000428242 164 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 MTCYBP15-201ENST00000433123 1127 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 RPL39P6-201ENST00000448289 150 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 MTND5P13-201ENST00000513046 1079 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.08□□□□□ -2.4
CSMD3Q7Z407 AC090330.1-201ENST00000588646 764 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.08□□□□□ -2.4
CSMD3Q7Z407 AC017083.3-201ENST00000609955 700 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
CSMD3Q7Z407 U6.99-201ENST00000637524 83 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 MTND4P14-201ENST00000435799 1354 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 SNORD114-31-201ENST00000363219 75 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 RNU6-637P-201ENST00000384050 107 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 Y_RNA.468-201ENST00000384298 102 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 MIR605-201ENST00000385078 83 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.08□□□□□ -2.4
CSMD3Q7Z407 NDUFB4P10-201ENST00000452541 359 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.08□□□□□ -2.4
CSMD3Q7Z407 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.08□□□□□ -2.4
CSMD3Q7Z407 AC136619.2-201ENST00000563361 631 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 MIR4637-201ENST00000582405 84 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 AC034229.4-201ENST00000607861 441 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 U4.2-201ENST00000618561 85 ntBASIC0.08□□□□□ -2.4
CSMD3Q7Z407 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.08□□□□□ -2.4
CSMD3Q7Z407 RNY3P5-201ENST00000384127 102 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
CSMD3Q7Z407 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
CSMD3Q7Z407 RNU2-23P-201ENST00000410545 195 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 AL161935.2-201ENST00000414627 60 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 MTCO3P45-201ENST00000443036 613 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.07□□□□□ -2.4
CSMD3Q7Z407 BET1P1-201ENST00000482276 359 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 PDCD5P2-201ENST00000507570 312 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 AC048346.1-201ENST00000510247 144 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 RNA5SP481-201ENST00000516814 122 ntBASIC0.07□□□□□ -2.4
CSMD3Q7Z407 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.07□□□□□ -2.4
CSMD3Q7Z407 RNU6-87P-201ENST00000607561 108 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms