Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 ELOCP5-201ENST00000604924 333 ntBASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 AL132765.2-201ENST00000610812 351 ntBASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 AC112487.2-201ENST00000637950 304 ntBASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRT28Q7Z3Y7 ZNF519P1-201ENST00000449011 1626 ntBASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 MAPK10-322ENST00000641485 4530 ntBASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 Y_RNA.226-201ENST00000364337 114 ntBASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 Y_RNA.339-201ENST00000365325 102 ntBASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 Y_RNA.474-201ENST00000384341 102 ntBASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 RNU2-49P-201ENST00000410666 184 ntBASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 AC012308.1-201ENST00000451232 178 ntBASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 AC130509.1-201ENST00000464158 433 ntBASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 AC007536.1-201ENST00000533382 349 ntBASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.26□□□□□ -1.89
KRT28Q7Z3Y7 MTND4P29-201ENST00000503122 1372 ntBASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 AC008264.2-201ENST00000610193 3731 ntBASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 RNU6-827P-201ENST00000365553 106 ntBASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 Y_RNA.509-201ENST00000384506 99 ntBASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 AC023141.4-201ENST00000412031 328 ntBASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 AL590632.1-201ENST00000424289 371 ntBASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 AC116655.1-201ENST00000508324 901 ntBASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 RNU6-277P-201ENST00000516272 106 ntBASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 AC022634.1-201ENST00000520765 532 ntBASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 AP005639.2-201ENST00000527592 928 ntBASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 AC006199.1-201ENST00000548728 219 ntBASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 AL670379.10-201ENST00000604330 253 ntBASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 AL670379.9-201ENST00000605428 253 ntBASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 MIR1302-1-201ENST00000637932 143 ntBASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
KRT28Q7Z3Y7 Y_RNA.61-201ENST00000362835 102 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 RNU4-73P-201ENST00000363164 141 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 RNU6-527P-201ENST00000363425 104 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 RNU1-105P-201ENST00000363470 161 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 Y_RNA.338-201ENST00000365320 114 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 Y_RNA.384-201ENST00000383909 102 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 MIR767-201ENST00000390228 109 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 RNA5SP354-201ENST00000391247 136 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 MIR548K-201ENST00000408406 116 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 RPL37P10-201ENST00000412884 288 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 RPL7P37-201ENST00000425095 738 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 RPS15AP10-201ENST00000432472 382 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 AL161651.1-201ENST00000440882 223 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 MTND4P17-201ENST00000470444 350 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 CKS1BP2-201ENST00000497342 240 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 AK3P2-201ENST00000507976 429 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 AC010186.2-204ENST00000537668 439 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 SNRPGP18-201ENST00000553000 214 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 AC016727.1-205ENST00000605437 569 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 AL121917.1-203ENST00000605534 577 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 AC064836.2-201ENST00000609491 462 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 MIR6873-201ENST00000622788 63 ntBASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRT28Q7Z3Y7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRT28Q7Z3Y7 CDC27P3-201ENST00000635418 1910 ntBASIC3.23□□□□□ -1.89
KRT28Q7Z3Y7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.23□□□□□ -1.89
KRT28Q7Z3Y7 RNU6-78P-201ENST00000362897 107 ntBASIC3.23□□□□□ -1.89
KRT28Q7Z3Y7 RNU6-95P-201ENST00000384697 107 ntBASIC3.23□□□□□ -1.89
KRT28Q7Z3Y7 RNU6-293P-201ENST00000411259 106 ntBASIC3.23□□□□□ -1.89
KRT28Q7Z3Y7 Z98742.2-201ENST00000431564 187 ntBASIC3.23□□□□□ -1.89
KRT28Q7Z3Y7 RPS3AP52-201ENST00000435639 297 ntBASIC3.23□□□□□ -1.89
KRT28Q7Z3Y7 MTND1P17-201ENST00000448961 204 ntBASIC3.23□□□□□ -1.89
KRT28Q7Z3Y7 Y_RNA.635-201ENST00000459041 101 ntBASIC3.23□□□□□ -1.89
KRT28Q7Z3Y7 RNU6-1037P-201ENST00000459571 107 ntBASIC3.23□□□□□ -1.89
KRT28Q7Z3Y7 AC018437.1-201ENST00000492214 406 ntBASIC3.23□□□□□ -1.89
KRT28Q7Z3Y7 MTND5P5-201ENST00000503764 376 ntBASIC3.23□□□□□ -1.89
KRT28Q7Z3Y7 AC116337.1-201ENST00000509680 687 ntBASIC3.23□□□□□ -1.89
KRT28Q7Z3Y7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.23□□□□□ -1.89
KRT28Q7Z3Y7 SNORA43.2-201ENST00000516652 128 ntBASIC3.23□□□□□ -1.89
KRT28Q7Z3Y7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 419.4 ms