Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SNORA20.2-201ENST00000383922 131 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 RNU6-160P-201ENST00000384591 107 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 Y_RNA.576-201ENST00000384781 102 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
SCXQ7RTU7 SNORA67.5-201ENST00000391036 107 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 AC068050.1-201ENST00000394891 380 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 RNU4-62P-201ENST00000410125 130 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 Y_RNA.598-201ENST00000410480 95 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.07□□□□□ -2.24
SCXQ7RTU7 AL593851.1-201ENST00000426171 157 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 AC000111.3-201ENST00000433478 193 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.07□□□□□ -2.24
SCXQ7RTU7 AC010409.1-201ENST00000487382 476 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.07□□□□□ -2.24
SCXQ7RTU7 TPT1P8-201ENST00000510120 555 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.07□□□□□ -2.24
SCXQ7RTU7 AC074344.1-201ENST00000512823 224 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 FABP5P5-201ENST00000515537 406 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 SNORA31.17-201ENST00000516953 127 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 RNU2-46P-201ENST00000517038 113 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.07□□□□□ -2.24
SCXQ7RTU7 AC090572.1-201ENST00000519251 160 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.07□□□□□ -2.24
SCXQ7RTU7 AL356057.1-201ENST00000533798 831 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.07□□□□□ -2.24
SCXQ7RTU7 MIR3169-201ENST00000578032 83 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 MIR4255-201ENST00000579351 72 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 MIR4303-201ENST00000581299 66 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 AC005771.1-201ENST00000585581 349 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 AL121992.2-201ENST00000606262 256 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 AC009159.2-201ENST00000617603 606 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 AC022960.3-201ENST00000619794 441 ntBASIC1.07□□□□□ -2.24
SCXQ7RTU7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
SCXQ7RTU7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SCXQ7RTU7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SCXQ7RTU7 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
SCXQ7RTU7 RNU6-23P-201ENST00000363283 107 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 RNU6-105P-201ENST00000363909 104 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 RNA5SP493-201ENST00000364115 91 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.06□□□□□ -2.24
SCXQ7RTU7 MIR544A-201ENST00000384855 91 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 AL357139.1-201ENST00000407792 426 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 OR6C66P-201ENST00000414917 930 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SCXQ7RTU7 BTF3P4-201ENST00000418852 495 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SCXQ7RTU7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.06□□□□□ -2.24
SCXQ7RTU7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.06□□□□□ -2.24
SCXQ7RTU7 UBE2D3P4-201ENST00000441973 436 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 AL357134.1-201ENST00000445848 426 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 AL360221.1-201ENST00000445989 335 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 ZNF114P1-201ENST00000453500 292 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 SNRPFP4-201ENST00000456366 242 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.06□□□□□ -2.24
SCXQ7RTU7 RNU1-131P-201ENST00000458943 161 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 AL163540.1-201ENST00000485382 386 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 RNU6-1220P-201ENST00000517126 108 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.06□□□□□ -2.24
SCXQ7RTU7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.06□□□□□ -2.24
SCXQ7RTU7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.06□□□□□ -2.24
SCXQ7RTU7 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.06□□□□□ -2.24
SCXQ7RTU7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.06□□□□□ -2.24
SCXQ7RTU7 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SCXQ7RTU7 AC103987.3-201ENST00000582071 292 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 BNIP3P39-201ENST00000601077 554 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 AL022161.1-201ENST00000604390 213 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 AP001485.1-201ENST00000604799 199 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.06□□□□□ -2.24
SCXQ7RTU7 MIR8074-201ENST00000615081 81 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 AC068787.1-201ENST00000623908 691 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SCXQ7RTU7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
SCXQ7RTU7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.06□□□□□ -2.24
SCXQ7RTU7 AP000560.1-201ENST00000624150 1937 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 AC233981.2-201ENST00000611524 1614 ntBASIC1.06□□□□□ -2.24
SCXQ7RTU7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SCXQ7RTU7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SCXQ7RTU7 RNU6-527P-201ENST00000363425 104 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 RNU5F-7P-201ENST00000363696 115 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 Y_RNA.238-201ENST00000364441 102 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 Y_RNA.332-201ENST00000365271 113 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 RNU6-45P-201ENST00000384471 107 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 C1DP2-201ENST00000418167 426 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.05□□□□□ -2.24
SCXQ7RTU7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.05□□□□□ -2.24
SCXQ7RTU7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.05□□□□□ -2.24
SCXQ7RTU7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.05□□□□□ -2.24
SCXQ7RTU7 AC104850.1-201ENST00000435940 476 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.05□□□□□ -2.24
SCXQ7RTU7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.05□□□□□ -2.24
SCXQ7RTU7 AC005178.1-201ENST00000508392 440 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.05□□□□□ -2.24
SCXQ7RTU7 SNORA3.4-201ENST00000515969 96 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 Vault.3-201ENST00000516676 95 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 AP003034.1-201ENST00000534621 422 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 SUB1P4-201ENST00000566062 339 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.05□□□□□ -2.24
SCXQ7RTU7 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.05□□□□□ -2.24
SCXQ7RTU7 SNORD53B-201ENST00000577887 78 ntBASIC1.05□□□□□ -2.24
SCXQ7RTU7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms