Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 MIR627-201ENST00000384979 97 ntBASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 RNU6-1009P-201ENST00000390996 107 ntBASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 AL445529.1-201ENST00000398713 389 ntBASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 AC104389.3-201ENST00000445629 235 ntBASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 MTND5P5-201ENST00000503764 376 ntBASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 AC096745.1-201ENST00000509945 370 ntBASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 MRPS36P2-201ENST00000512569 299 ntBASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 GLYCAM1-201ENST00000546596 285 ntBASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 AC090897.2-201ENST00000581715 130 ntBASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 AL356575.1-201ENST00000603008 283 ntBASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 AC104237.2-201ENST00000612456 443 ntBASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 U4.3-201ENST00000621047 82 ntBASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 TPTEP1-208ENST00000636884 213 ntBASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
SYNE3Q6ZMZ3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 AC135776.4-201ENST00000624300 1904 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 Y_RNA.111-201ENST00000363248 100 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 RNA5SP393-201ENST00000363423 117 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 SNORA25.6-201ENST00000364121 118 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 SNORA68.1-201ENST00000364537 132 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 RNU1-138P-201ENST00000384093 164 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 Y_RNA.474-201ENST00000384341 102 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 RNA5SP390-201ENST00000410191 113 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 RN7SKP158-201ENST00000410453 326 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 AL590632.1-201ENST00000424289 371 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 RPS15AP10-201ENST00000432472 382 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 MICF-203ENST00000432679 129 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 AL031274.1-201ENST00000450334 232 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 PPP1R2P5-201ENST00000457256 603 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 RNU6-1037P-201ENST00000459571 107 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 AC130509.1-201ENST00000464158 433 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 RN7SKP24-201ENST00000515888 284 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 RNU6-507P-201ENST00000516045 100 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 SNORA31.6-201ENST00000516241 130 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 AC105029.1-201ENST00000520250 669 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 AC060766.3-201ENST00000591442 263 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 AL133215.3-201ENST00000609801 448 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 SCARNA15.3-201ENST00000626315 122 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 SCARNA4.1-201ENST00000628597 123 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 MTND4P23-201ENST00000447723 1363 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 MTND4P12-201ENST00000498999 1377 ntBASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.94□□□□□ -1.94
SYNE3Q6ZMZ3 RBBP8P1-201ENST00000449447 1844 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 AL109809.4-201ENST00000603520 2185 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 Y_RNA.142-201ENST00000363491 102 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 RNA5SP68-201ENST00000363885 119 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 RNA5SP456-201ENST00000364002 114 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 RNU5E-4P-201ENST00000364931 120 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 RNU6-1083P-201ENST00000384022 107 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 AL030996.1-201ENST00000411430 235 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 AL139396.1-201ENST00000421137 167 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 AC018437.1-201ENST00000492214 406 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 GZMAP1-201ENST00000503054 631 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 SCARNA17.1-201ENST00000516211 143 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 SCARNA17.2-201ENST00000516334 143 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 AC104576.1-201ENST00000524225 88 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 AC103996.1-201ENST00000555468 102 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 AL049779.4-201ENST00000604500 156 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 SCARNA17.4-201ENST00000614296 143 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 uc_338.15-201ENST00000615470 191 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 MIR6817-201ENST00000615588 66 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 AC009233.1-201ENST00000616477 371 ntBASIC2.93□□□□□ -1.94
SYNE3Q6ZMZ3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SYNE3Q6ZMZ3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SYNE3Q6ZMZ3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.92□□□□□ -1.94
SYNE3Q6ZMZ3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
SYNE3Q6ZMZ3 RNU6-1010P-201ENST00000362757 107 ntBASIC2.92□□□□□ -1.94
SYNE3Q6ZMZ3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SYNE3Q6ZMZ3 DEFA7P-201ENST00000382676 285 ntBASIC2.92□□□□□ -1.94
SYNE3Q6ZMZ3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SYNE3Q6ZMZ3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SYNE3Q6ZMZ3 AC243964.1-201ENST00000441814 261 ntBASIC2.92□□□□□ -1.94
SYNE3Q6ZMZ3 RNU7-187P-201ENST00000458985 68 ntBASIC2.92□□□□□ -1.94
SYNE3Q6ZMZ3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.92□□□□□ -1.94
SYNE3Q6ZMZ3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.92□□□□□ -1.94
SYNE3Q6ZMZ3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.92□□□□□ -1.94
SYNE3Q6ZMZ3 IMMP1LP2-201ENST00000552954 492 ntBASIC2.92□□□□□ -1.94
SYNE3Q6ZMZ3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms