Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TM4SF20Q53R12 BX322639.1-202ENST00000423987 2213 ntBASIC3.35□□□□□ -1.87
TM4SF20Q53R12 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
TM4SF20Q53R12 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TM4SF20Q53R12 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TM4SF20Q53R12 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.34□□□□□ -1.87
TM4SF20Q53R12 RNU4-15P-201ENST00000362613 141 ntBASIC3.34□□□□□ -1.87
TM4SF20Q53R12 Y_RNA.143-201ENST00000363520 106 ntBASIC3.34□□□□□ -1.87
TM4SF20Q53R12 ARL5AP4-201ENST00000430731 512 ntBASIC3.34□□□□□ -1.87
TM4SF20Q53R12 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.34□□□□□ -1.87
TM4SF20Q53R12 AP000705.1-201ENST00000454567 350 ntBASIC3.34□□□□□ -1.87
TM4SF20Q53R12 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.34□□□□□ -1.87
TM4SF20Q53R12 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.34□□□□□ -1.87
TM4SF20Q53R12 EIF4A1P12-201ENST00000551910 141 ntBASIC3.34□□□□□ -1.87
TM4SF20Q53R12 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.34□□□□□ -1.87
TM4SF20Q53R12 AC079587.1-201ENST00000603846 277 ntBASIC3.34□□□□□ -1.87
TM4SF20Q53R12 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.34□□□□□ -1.87
TM4SF20Q53R12 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.34□□□□□ -1.87
TM4SF20Q53R12 PCGEM1.1-201ENST00000613431 131 ntBASIC3.34□□□□□ -1.87
TM4SF20Q53R12 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.34□□□□□ -1.87
TM4SF20Q53R12 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.34□□□□□ -1.88
TM4SF20Q53R12 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.34□□□□□ -1.88
TM4SF20Q53R12 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TM4SF20Q53R12 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TM4SF20Q53R12 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.33□□□□□ -1.88
TM4SF20Q53R12 AL391987.6-201ENST00000305671 199 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 Y_RNA.20-201ENST00000362479 113 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 RNU4-90P-201ENST00000362773 141 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 RNA5SP175-201ENST00000364275 119 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 Y_RNA.230-201ENST00000364348 109 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 Y_RNA.352-201ENST00000365439 102 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.33□□□□□ -1.88
TM4SF20Q53R12 Y_RNA.416-201ENST00000384014 113 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 RNA5SP201-201ENST00000410316 124 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 MIR1911-201ENST00000410783 80 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 SNORA74C-2-201ENST00000411179 201 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 ELOCP19-201ENST00000411919 318 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 RPL18P10-201ENST00000425606 538 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 WARS2P1-201ENST00000429678 537 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.33□□□□□ -1.88
TM4SF20Q53R12 CYCSP35-201ENST00000451978 304 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 MTND4LP30-201ENST00000454092 297 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 CYP2C59P-201ENST00000457790 269 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 RN7SL810P-201ENST00000493031 276 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 IFITM8P-201ENST00000522529 394 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.33□□□□□ -1.88
TM4SF20Q53R12 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.33□□□□□ -1.88
TM4SF20Q53R12 AC026470.2-201ENST00000561492 181 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.33□□□□□ -1.88
TM4SF20Q53R12 AC022655.2-201ENST00000577280 318 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 MIR3186-201ENST00000577404 85 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 MIR3128-201ENST00000581957 66 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 SNRPGP20-201ENST00000604477 205 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 AP001282.2-201ENST00000616149 309 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 uc_338.13-201ENST00000618243 179 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 AC092628.2-201ENST00000622492 339 ntBASIC3.33□□□□□ -1.88
TM4SF20Q53R12 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TM4SF20Q53R12 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
TM4SF20Q53R12 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TM4SF20Q53R12 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TM4SF20Q53R12 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.32□□□□□ -1.88
TM4SF20Q53R12 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.32□□□□□ -1.88
TM4SF20Q53R12 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TM4SF20Q53R12 snoU2_19.2-201ENST00000363024 80 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 RNU6-1145P-201ENST00000384246 107 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 RNU6-378P-201ENST00000384324 107 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 MIR329-1-201ENST00000385028 80 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 SNORA46.1-201ENST00000391069 153 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 Y_RNA.595-201ENST00000410403 105 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 RN7SKP58-201ENST00000411010 305 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 RNU6-1001P-201ENST00000411265 100 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.32□□□□□ -1.88
TM4SF20Q53R12 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.32□□□□□ -1.88
TM4SF20Q53R12 TPT1P12-201ENST00000448968 492 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 RN7SL98P-201ENST00000462271 300 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.32□□□□□ -1.88
TM4SF20Q53R12 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.32□□□□□ -1.88
TM4SF20Q53R12 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.32□□□□□ -1.88
TM4SF20Q53R12 AC074133.1-201ENST00000515696 183 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 RNU6-586P-201ENST00000517265 104 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 HSPE1P18-201ENST00000517602 280 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 AC023824.2-201ENST00000566185 400 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.32□□□□□ -1.88
TM4SF20Q53R12 AC113403.1-201ENST00000604910 193 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 SNORD113-5-201ENST00000607261 78 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 AC010999.1-201ENST00000611856 324 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 AL442067.1-201ENST00000613261 223 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.32□□□□□ -1.88
TM4SF20Q53R12 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TM4SF20Q53R12 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TM4SF20Q53R12 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
TM4SF20Q53R12 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TM4SF20Q53R12 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TM4SF20Q53R12 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TM4SF20Q53R12 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TM4SF20Q53R12 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TM4SF20Q53R12 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
TM4SF20Q53R12 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TM4SF20Q53R12 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms