Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.18□□□□□ -2.06
SHROOM1Q2M3G4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.18□□□□□ -2.06
SHROOM1Q2M3G4 SCARNA18-201ENST00000459004 134 ntBASIC2.18□□□□□ -2.06
SHROOM1Q2M3G4 RNU7-63P-201ENST00000459054 62 ntBASIC2.18□□□□□ -2.06
SHROOM1Q2M3G4 RNU6-717P-201ENST00000459076 104 ntBASIC2.18□□□□□ -2.06
SHROOM1Q2M3G4 AC108078.1-201ENST00000508073 725 ntBASIC2.18□□□□□ -2.06
SHROOM1Q2M3G4 RNU6-405P-201ENST00000516637 110 ntBASIC2.18□□□□□ -2.06
SHROOM1Q2M3G4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.18□□□□□ -2.06
SHROOM1Q2M3G4 AP005435.4-201ENST00000529514 284 ntBASIC2.18□□□□□ -2.06
SHROOM1Q2M3G4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.18□□□□□ -2.06
SHROOM1Q2M3G4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.18□□□□□ -2.06
SHROOM1Q2M3G4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.18□□□□□ -2.06
SHROOM1Q2M3G4 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.18□□□□□ -2.06
SHROOM1Q2M3G4 AC026271.5-201ENST00000577873 130 ntBASIC2.18□□□□□ -2.06
SHROOM1Q2M3G4 APOOP1-201ENST00000604695 592 ntBASIC2.18□□□□□ -2.06
SHROOM1Q2M3G4 RNU6-6P-201ENST00000606623 107 ntBASIC2.18□□□□□ -2.06
SHROOM1Q2M3G4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
SHROOM1Q2M3G4 AC048344.4-201ENST00000619744 527 ntBASIC2.18□□□□□ -2.06
SHROOM1Q2M3G4 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 AL359851.1-201ENST00000569460 4997 ntBASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 RNA5SP190-201ENST00000365222 118 ntBASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 RNU6-393P-201ENST00000384475 107 ntBASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 AL356432.1-201ENST00000405809 419 ntBASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 RNU2-66P-201ENST00000410650 161 ntBASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 RNU4-46P-201ENST00000410818 138 ntBASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 RNU6-607P-201ENST00000411283 108 ntBASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 AL663109.1-201ENST00000411498 844 ntBASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 AL606489.2-201ENST00000433886 234 ntBASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 AC104564.1-201ENST00000493028 407 ntBASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 MTCO3P7-201ENST00000510008 774 ntBASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 AC104136.1-201ENST00000512969 394 ntBASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 RNU5B-3P-201ENST00000516601 115 ntBASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 SNORA43.2-201ENST00000516652 128 ntBASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 AC021646.1-201ENST00000605469 484 ntBASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 AC245008.1-201ENST00000608123 476 ntBASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 AL158209.2-201ENST00000619266 216 ntBASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SHROOM1Q2M3G4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 RNU6-552P-201ENST00000362869 119 ntBASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 Y_RNA.324-201ENST00000365165 102 ntBASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 RNU6-1042P-201ENST00000384204 107 ntBASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 Y_RNA.559-201ENST00000384686 107 ntBASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 SNORA16.2-201ENST00000390991 127 ntBASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 RNU6-1158P-201ENST00000391167 107 ntBASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 RNU6-903P-201ENST00000391270 109 ntBASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 MIR1294-201ENST00000408503 142 ntBASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 AL030996.1-201ENST00000411430 235 ntBASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 AL353689.1-201ENST00000438895 199 ntBASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 AL161788.1-201ENST00000441805 169 ntBASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 PRPS1P1-201ENST00000445305 876 ntBASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 SNRPFP3-201ENST00000457792 225 ntBASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 AC025033.1-201ENST00000463883 194 ntBASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 RPL30P12-201ENST00000474666 353 ntBASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 RPL7P43-201ENST00000478876 753 ntBASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 AC080013.6-201ENST00000606185 215 ntBASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 AP001596.2-201ENST00000608410 312 ntBASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SHROOM1Q2M3G4 MTND5P26-201ENST00000426018 1752 ntBASIC2.15□□□□□ -2.06
SHROOM1Q2M3G4 RNU1-72P-201ENST00000362976 153 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 SNORD114-19-201ENST00000363072 75 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 SNORA16B-201ENST00000364674 135 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 RNU6-996P-201ENST00000365438 107 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 RNU6-259P-201ENST00000383999 107 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 Y_RNA.436-201ENST00000384097 102 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 RNU6-843P-201ENST00000384454 104 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 RNU6-1127P-201ENST00000384580 107 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 AL122001.1-201ENST00000457027 370 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 PMCHL2-203ENST00000457791 237 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 AC091133.4-201ENST00000511142 308 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 RNU2-69P-201ENST00000516061 100 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 SNORA48.11-201ENST00000517015 89 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 GNAI2P1-201ENST00000541815 315 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 AC079598.5-201ENST00000547460 117 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 HIF1AP1-201ENST00000553642 175 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 AC123912.5-201ENST00000605470 343 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 AL121917.1-203ENST00000605534 577 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 AC002044.1-201ENST00000606707 158 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 AC093783.1-201ENST00000612976 329 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 AC139792.3-201ENST00000623525 224 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 SCARNA4-202ENST00000625402 129 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 MIR6863-201ENST00000636112 90 ntBASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SHROOM1Q2M3G4 MTND4P14-201ENST00000435799 1354 ntBASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SHROOM1Q2M3G4 RNU6-78P-201ENST00000362897 107 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms