Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 AC114801.2-201ENST00000503825 781 ntBASIC1.18□□□□□ -2.22
SSX1Q16384 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.18□□□□□ -2.22
SSX1Q16384 MTND3P5-201ENST00000512798 333 ntBASIC1.18□□□□□ -2.22
SSX1Q16384 AC074344.1-201ENST00000512823 224 ntBASIC1.18□□□□□ -2.22
SSX1Q16384 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.18□□□□□ -2.22
SSX1Q16384 AC090821.2-201ENST00000523552 176 ntBASIC1.18□□□□□ -2.22
SSX1Q16384 AP000873.5-201ENST00000533906 236 ntBASIC1.18□□□□□ -2.22
SSX1Q16384 TRAV32-201ENST00000553993 340 ntBASIC1.18□□□□□ -2.22
SSX1Q16384 AC008269.2-201ENST00000561915 1105 ntBASIC1.18□□□□□ -2.22
SSX1Q16384 AC015720.1-201ENST00000565251 277 ntBASIC1.18□□□□□ -2.22
SSX1Q16384 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.18□□□□□ -2.22
SSX1Q16384 AC103987.3-201ENST00000582071 292 ntBASIC1.18□□□□□ -2.22
SSX1Q16384 BNIP3P39-201ENST00000601077 554 ntBASIC1.18□□□□□ -2.22
SSX1Q16384 AL022161.1-201ENST00000604390 213 ntBASIC1.18□□□□□ -2.22
SSX1Q16384 AL050343.2-201ENST00000607338 280 ntBASIC1.18□□□□□ -2.22
SSX1Q16384 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.18□□□□□ -2.22
SSX1Q16384 AC022513.1-201ENST00000624512 117 ntBASIC1.18□□□□□ -2.22
SSX1Q16384 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.18□□□□□ -2.22
SSX1Q16384 ZNF72P-201ENST00000425869 1908 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SSX1Q16384 Y_RNA.332-201ENST00000365271 113 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SSX1Q16384 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SSX1Q16384 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
SSX1Q16384 Y_RNA.598-201ENST00000410480 95 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 AC011233.1-201ENST00000422812 283 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 MTND2P4-201ENST00000445034 1004 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.17□□□□□ -2.22
SSX1Q16384 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.17□□□□□ -2.22
SSX1Q16384 ART2BP-201ENST00000453501 499 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.17□□□□□ -2.22
SSX1Q16384 AC145146.1-201ENST00000496370 254 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 MTCYBP18-201ENST00000501056 747 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 AC022447.4-201ENST00000504053 364 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 AC104136.1-201ENST00000512969 394 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 FABP5P5-201ENST00000515537 406 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 SNORA31.17-201ENST00000516953 127 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 RNA5SP490-201ENST00000517141 136 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 AP003033.1-201ENST00000527244 415 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 AC087883.1-201ENST00000551882 391 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.17□□□□□ -2.22
SSX1Q16384 AC027807.1-201ENST00000559921 996 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.17□□□□□ -2.22
SSX1Q16384 AC008752.3-201ENST00000588113 712 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 AL034555.1-201ENST00000604816 211 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 PRR13P7-201ENST00000605538 430 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.17□□□□□ -2.22
SSX1Q16384 AC013412.1-201ENST00000610687 192 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SSX1Q16384 AL133173.2-201ENST00000614270 90 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 MIR8074-201ENST00000615081 81 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 MTND5P17-201ENST00000418405 1603 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SSX1Q16384 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SSX1Q16384 AC091812.1-201ENST00000432235 1948 ntBASIC1.17□□□□□ -2.22
SSX1Q16384 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SSX1Q16384 LINC02555-201ENST00000563933 1951 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 RNU6-37P-201ENST00000362692 107 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 RNU6-11P-201ENST00000364234 107 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 Y_RNA.324-201ENST00000365165 102 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.16□□□□□ -2.22
SSX1Q16384 RNU6-25P-201ENST00000383873 107 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 RNU6-1-201ENST00000383898 107 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 RNU6-203P-201ENST00000384038 104 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 RNU6-48P-201ENST00000384161 107 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 RNU6-36P-201ENST00000384172 107 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 RNU6-4P-201ENST00000384205 107 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 RNU6-5P-201ENST00000384238 107 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 RNU6-3P-201ENST00000384314 107 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 RNU6-16P-201ENST00000384385 107 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 RNU6-15P-201ENST00000384534 107 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 RNU6-2-201ENST00000384627 107 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 RNU6-29P-201ENST00000384637 107 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 RNU6-9-201ENST00000384776 107 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 RNU6-33P-201ENST00000384793 107 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 MIR150-201ENST00000385048 84 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 AL669831.1-202ENST00000428504 417 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.16□□□□□ -2.22
SSX1Q16384 AL513124.1-201ENST00000450410 614 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 SNORA59A-201ENST00000459326 152 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 AC130509.1-201ENST00000464158 433 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 AC005908.1-201ENST00000468701 347 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 AC132942.1-201ENST00000486753 483 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.16□□□□□ -2.22
SSX1Q16384 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SSX1Q16384 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.16□□□□□ -2.22
SSX1Q16384 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.16□□□□□ -2.22
SSX1Q16384 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.16□□□□□ -2.22
SSX1Q16384 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.16□□□□□ -2.22
SSX1Q16384 AC005786.1-201ENST00000588553 154 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 AC090578.1-201ENST00000604955 591 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 RNU6-6P-201ENST00000606623 107 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
SSX1Q16384 AC004223.4-201ENST00000612426 332 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 AC011155.2-201ENST00000623202 216 ntBASIC1.16□□□□□ -2.22
SSX1Q16384 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.16□□□□□ -2.22
SSX1Q16384 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.22
SSX1Q16384 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.15□□□□□ -2.22
SSX1Q16384 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms