Protein–RNA interactions for Protein: Q13509

TUBB3, Tubulin beta-3 chain, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3Q13509 AC107294.3-201ENST00000609211 526 ntBASIC3.2□□□□□ -1.9
TUBB3Q13509 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.2□□□□□ -1.9
TUBB3Q13509 7SK.10-201ENST00000621414 298 ntBASIC3.2□□□□□ -1.9
TUBB3Q13509 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TUBB3Q13509 ZNF72P-201ENST00000425869 1908 ntBASIC3.2□□□□□ -1.9
TUBB3Q13509 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
TUBB3Q13509 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
TUBB3Q13509 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TUBB3Q13509 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.19□□□□□ -1.9
TUBB3Q13509 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
TUBB3Q13509 Y_RNA.123-201ENST00000363338 102 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 RNU6-26P-201ENST00000383985 107 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 RNU6-784P-201ENST00000384330 106 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 SNORA46-201ENST00000384762 135 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 RNU6-823P-201ENST00000391042 103 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 SAR1AP2-201ENST00000392696 594 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TUBB3Q13509 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.19□□□□□ -1.9
TUBB3Q13509 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.19□□□□□ -1.9
TUBB3Q13509 BPY2DP-201ENST00000422208 265 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TUBB3Q13509 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.19□□□□□ -1.9
TUBB3Q13509 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.19□□□□□ -1.9
TUBB3Q13509 AC010099.1-201ENST00000455434 375 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 AC006026.2-201ENST00000457376 180 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 snoU13.28-201ENST00000459235 104 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 COX6CP5-201ENST00000527162 228 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 HSBP1P1-201ENST00000555205 166 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 AC008269.2-201ENST00000561915 1105 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 AC012493.2-201ENST00000595083 291 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 AC005000.2-201ENST00000605468 310 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 YPEL5P2-201ENST00000605553 359 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 uc_338.1-201ENST00000612113 180 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 AL132822.1-201ENST00000617063 513 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 AC138305.3-201ENST00000624988 240 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 AC241585.2-209ENST00000638217 143 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 MTND5P7-201ENST00000413558 1798 ntBASIC3.19□□□□□ -1.9
TUBB3Q13509 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TUBB3Q13509 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.19□□□□□ -1.9
TUBB3Q13509 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TUBB3Q13509 AC103988.1-201ENST00000566382 2177 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 CD24P4-201ENST00000382840 243 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 RNU6-196P-201ENST00000384315 107 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 SNORD116-20-201ENST00000384529 92 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 SNORA48.8-201ENST00000391324 134 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 FTH1P15-201ENST00000406984 280 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 AP000275.1-201ENST00000411943 390 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 AC092423.1-201ENST00000430165 186 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 MTCYBP9-201ENST00000431021 303 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.18□□□□□ -1.9
TUBB3Q13509 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.18□□□□□ -1.9
TUBB3Q13509 HMGN2P10-201ENST00000448085 265 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 U8.20-201ENST00000459445 131 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 RN7SL283P-201ENST00000489055 303 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 AC092185.1-201ENST00000491371 97 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 RN7SL504P-201ENST00000494496 287 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 RNU7-4P-201ENST00000516961 62 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 Y_RNA.721-201ENST00000517207 102 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.18□□□□□ -1.9
TUBB3Q13509 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.18□□□□□ -1.9
TUBB3Q13509 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.18□□□□□ -1.9
TUBB3Q13509 MIR5188-201ENST00000583467 113 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 HMGN2P15-201ENST00000585707 270 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 AC073657.2-201ENST00000605661 303 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 AC087588.2-201ENST00000617667 426 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 MIR8057-201ENST00000620957 69 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 SNORA50A-202ENST00000629536 136 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 AC008264.2-201ENST00000610193 3731 ntBASIC3.18□□□□□ -1.9
TUBB3Q13509 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TUBB3Q13509 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.17□□□□□ -1.9
TUBB3Q13509 RNU6-799P-201ENST00000363567 107 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 RNU6-1027P-201ENST00000383998 107 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 MIR625-201ENST00000385047 85 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 AL357075.1-201ENST00000404107 726 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 RNU6-101P-201ENST00000410323 104 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 RNA5SP494-201ENST00000410653 129 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.17□□□□□ -1.9
TUBB3Q13509 RPL32P35-201ENST00000415214 394 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 AL591043.1-201ENST00000432461 424 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 AC243964.1-201ENST00000441814 261 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 IPO7P1-201ENST00000442031 636 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TUBB3Q13509 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.17□□□□□ -1.9
TUBB3Q13509 RNU7-169P-201ENST00000459456 61 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 AP002884.2-201ENST00000471647 395 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.17□□□□□ -1.9
TUBB3Q13509 MRPL42P6-201ENST00000486397 371 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 MTCO2P24-201ENST00000515611 426 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 RNU6-581P-201ENST00000516214 105 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.17□□□□□ -1.9
TUBB3Q13509 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.17□□□□□ -1.9
TUBB3Q13509 NACAP3-201ENST00000552100 481 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 AC021739.1-201ENST00000559631 174 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.17□□□□□ -1.9
TUBB3Q13509 MIR4503-201ENST00000582187 83 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 AC091903.1-201ENST00000624322 454 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 AC110491.1-201ENST00000562191 2010 ntBASIC3.17□□□□□ -1.9
TUBB3Q13509 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TUBB3Q13509 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TUBB3Q13509 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms