Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 MIR383-201ENST00000362257 73 ntBASIC4.46□□□□□ -1.7
FOXC1Q12948 Y_RNA.17-201ENST00000362433 111 ntBASIC4.46□□□□□ -1.7
FOXC1Q12948 Y_RNA.93-201ENST00000363066 109 ntBASIC4.46□□□□□ -1.7
FOXC1Q12948 RNA5SP366-201ENST00000365454 123 ntBASIC4.46□□□□□ -1.7
FOXC1Q12948 MIR873-201ENST00000401120 77 ntBASIC4.46□□□□□ -1.7
FOXC1Q12948 EIF4HP2-201ENST00000424380 563 ntBASIC4.46□□□□□ -1.7
FOXC1Q12948 RPL19P16-201ENST00000433839 588 ntBASIC4.46□□□□□ -1.7
FOXC1Q12948 AC083899.1-201ENST00000454465 3819 ntBASIC4.46□□□□□ -1.7
FOXC1Q12948 RN7SL98P-201ENST00000462271 300 ntBASIC4.46□□□□□ -1.7
FOXC1Q12948 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXC1Q12948 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.46□□□□□ -1.7
FOXC1Q12948 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.46□□□□□ -1.7
FOXC1Q12948 EIF4A1P12-201ENST00000551910 141 ntBASIC4.46□□□□□ -1.7
FOXC1Q12948 AC027176.1-201ENST00000560204 514 ntBASIC4.46□□□□□ -1.7
FOXC1Q12948 MIR4286-201ENST00000580651 93 ntBASIC4.46□□□□□ -1.7
FOXC1Q12948 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.46□□□□□ -1.7
FOXC1Q12948 AC005972.2-201ENST00000604690 348 ntBASIC4.46□□□□□ -1.7
FOXC1Q12948 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
FOXC1Q12948 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXC1Q12948 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.46□□□□□ -1.7
FOXC1Q12948 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.46□□□□□ -1.7
FOXC1Q12948 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXC1Q12948 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXC1Q12948 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXC1Q12948 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
FOXC1Q12948 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
FOXC1Q12948 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
FOXC1Q12948 AC107027.3-201ENST00000565095 3473 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXC1Q12948 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
FOXC1Q12948 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXC1Q12948 AC007256.1-201ENST00000392253 2765 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXC1Q12948 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXC1Q12948 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXC1Q12948 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
FOXC1Q12948 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXC1Q12948 RNU6-600P-201ENST00000362524 99 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 Y_RNA.362-201ENST00000365518 110 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 MIR483-201ENST00000385070 76 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 MIR325-201ENST00000385260 98 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
FOXC1Q12948 RNU6-279P-201ENST00000391297 101 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 AC244098.2-201ENST00000422068 99 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 AL645608.4-201ENST00000423619 154 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 OR2AH1P-201ENST00000425717 928 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 AL117339.2-201ENST00000430475 180 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 RNU6-893P-201ENST00000458841 100 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 AC010285.1-201ENST00000470580 392 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 AC108145.1-201ENST00000503770 153 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 AC026726.1-201ENST00000512859 601 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXC1Q12948 AC068339.1-201ENST00000526965 141 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 AC007751.1-201ENST00000529260 376 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 AC105245.1-201ENST00000581934 244 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 MIR5006-201ENST00000583027 110 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 AL034555.1-201ENST00000604816 211 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 uc_338.4-201ENST00000616635 176 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.45□□□□□ -1.7
FOXC1Q12948 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXC1Q12948 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXC1Q12948 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXC1Q12948 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXC1Q12948 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXC1Q12948 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXC1Q12948 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXC1Q12948 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXC1Q12948 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXC1Q12948 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
FOXC1Q12948 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
FOXC1Q12948 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXC1Q12948 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
FOXC1Q12948 SNORA63.1-201ENST00000362493 131 ntBASIC4.44□□□□□ -1.7
FOXC1Q12948 U3.15-201ENST00000365398 212 ntBASIC4.44□□□□□ -1.7
FOXC1Q12948 RNU6-787P-201ENST00000384032 107 ntBASIC4.44□□□□□ -1.7
FOXC1Q12948 MIR181B1-201ENST00000385240 110 ntBASIC4.44□□□□□ -1.7
FOXC1Q12948 AL355796.1-201ENST00000406706 323 ntBASIC4.44□□□□□ -1.7
FOXC1Q12948 RNU6ATAC-201ENST00000408749 126 ntBASIC4.44□□□□□ -1.7
FOXC1Q12948 YME1L1P1-201ENST00000429435 297 ntBASIC4.44□□□□□ -1.7
FOXC1Q12948 AC022137.1-201ENST00000483735 151 ntBASIC4.44□□□□□ -1.7
FOXC1Q12948 SRIP1-201ENST00000489235 288 ntBASIC4.44□□□□□ -1.7
FOXC1Q12948 RNA5SP367-201ENST00000516557 118 ntBASIC4.44□□□□□ -1.7
FOXC1Q12948 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXC1Q12948 AC069200.1-201ENST00000609511 323 ntBASIC4.44□□□□□ -1.7
FOXC1Q12948 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXC1Q12948 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXC1Q12948 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
FOXC1Q12948 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXC1Q12948 AC022893.2-201ENST00000564832 3296 ntBASIC4.44□□□□□ -1.7
FOXC1Q12948 AL022311.1-201ENST00000623726 19416 ntBASIC4.44□□□□□ -1.7
FOXC1Q12948 AC020633.1-201ENST00000468439 2247 ntBASIC4.44□□□□□ -1.7
FOXC1Q12948 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXC1Q12948 AL031595.2-201ENST00000624215 19071 ntBASIC4.43□□□□□ -1.7
FOXC1Q12948 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.43□□□□□ -1.7
FOXC1Q12948 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXC1Q12948 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.43□□□□□ -1.7
FOXC1Q12948 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXC1Q12948 AC080128.1-201ENST00000474389 1917 ntBASIC4.43□□□□□ -1.7
FOXC1Q12948 AC021146.4-201ENST00000309229 279 ntBASIC4.43□□□□□ -1.7
FOXC1Q12948 RNU6-249P-201ENST00000363016 102 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms