Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN1BQ07699 RNU6-991P-201ENST00000516168 107 ntBASIC2.14□□□□□ -2.07
SCN1BQ07699 RNU6-835P-201ENST00000516974 104 ntBASIC2.14□□□□□ -2.07
SCN1BQ07699 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN1BQ07699 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.14□□□□□ -2.07
SCN1BQ07699 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN1BQ07699 AP001836.1-201ENST00000604675 523 ntBASIC2.14□□□□□ -2.07
SCN1BQ07699 AC068944.2-201ENST00000610373 403 ntBASIC2.14□□□□□ -2.07
SCN1BQ07699 AC103705.1-201ENST00000619013 241 ntBASIC2.14□□□□□ -2.07
SCN1BQ07699 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.14□□□□□ -2.07
SCN1BQ07699 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCN1BQ07699 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SCN1BQ07699 ZNF702P-202ENST00000434269 1966 ntBASIC2.13□□□□□ -2.07
SCN1BQ07699 RNA5SP456-201ENST00000364002 114 ntBASIC2.13□□□□□ -2.07
SCN1BQ07699 SNORD114-30-201ENST00000364448 72 ntBASIC2.13□□□□□ -2.07
SCN1BQ07699 RNU6-142P-201ENST00000384019 107 ntBASIC2.13□□□□□ -2.07
SCN1BQ07699 MIR1294-201ENST00000408503 142 ntBASIC2.13□□□□□ -2.07
SCN1BQ07699 SRIP3-201ENST00000413200 219 ntBASIC2.13□□□□□ -2.07
SCN1BQ07699 AL356379.1-201ENST00000414105 126 ntBASIC2.13□□□□□ -2.07
SCN1BQ07699 RPL23AP95-201ENST00000426806 265 ntBASIC2.13□□□□□ -2.07
SCN1BQ07699 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.13□□□□□ -2.07
SCN1BQ07699 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.13□□□□□ -2.07
SCN1BQ07699 AC245102.2-201ENST00000448956 180 ntBASIC2.13□□□□□ -2.07
SCN1BQ07699 ANXA2P1-201ENST00000505539 926 ntBASIC2.13□□□□□ -2.07
SCN1BQ07699 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.13□□□□□ -2.07
SCN1BQ07699 RNU6-323P-201ENST00000521915 107 ntBASIC2.13□□□□□ -2.07
SCN1BQ07699 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.13□□□□□ -2.07
SCN1BQ07699 AC007375.1-201ENST00000554513 578 ntBASIC2.13□□□□□ -2.07
SCN1BQ07699 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.13□□□□□ -2.07
SCN1BQ07699 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.13□□□□□ -2.07
SCN1BQ07699 AL357078.3-201ENST00000607528 618 ntBASIC2.13□□□□□ -2.07
SCN1BQ07699 MIR6840-201ENST00000611937 71 ntBASIC2.13□□□□□ -2.07
SCN1BQ07699 AC092608.2-201ENST00000624427 218 ntBASIC2.13□□□□□ -2.07
SCN1BQ07699 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SCN1BQ07699 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
SCN1BQ07699 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.13□□□□□ -2.07
SCN1BQ07699 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.12□□□□□ -2.07
SCN1BQ07699 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SCN1BQ07699 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.12□□□□□ -2.07
SCN1BQ07699 RNU6-82P-201ENST00000363970 107 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 Y_RNA.194-201ENST00000363985 102 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 SNORD32B-201ENST00000364460 84 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 RNU4-56P-201ENST00000364700 142 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 Y_RNA.504-201ENST00000384481 104 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 MIR29C-201ENST00000385231 88 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 RNU6-1106P-201ENST00000390845 107 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 RNU6-780P-201ENST00000391030 104 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 RNU6-648P-201ENST00000410190 107 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 BX510359.4-201ENST00000423750 193 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.12□□□□□ -2.07
SCN1BQ07699 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.12□□□□□ -2.07
SCN1BQ07699 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.12□□□□□ -2.07
SCN1BQ07699 MTCO2P3-201ENST00000442543 421 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.12□□□□□ -2.07
SCN1BQ07699 RPL21P99-201ENST00000480369 423 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 AC104435.1-201ENST00000483483 166 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 AC090255.1-201ENST00000495779 349 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 AC016632.1-201ENST00000503994 196 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 AC093259.1-201ENST00000509755 300 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.12□□□□□ -2.07
SCN1BQ07699 SNORA19.2-201ENST00000516013 114 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.12□□□□□ -2.07
SCN1BQ07699 AP005597.4-201ENST00000526762 229 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 AC025423.5-201ENST00000550230 219 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 AC121758.2-201ENST00000553271 193 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 AL512360.1-201ENST00000555346 234 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.12□□□□□ -2.07
SCN1BQ07699 LARP7P3-201ENST00000579888 337 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 AC078795.3-201ENST00000602913 472 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 AL356157.2-201ENST00000605122 111 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 AC005000.2-201ENST00000605468 310 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 AP000654.2-201ENST00000605633 586 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 AC092807.2-201ENST00000609367 243 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 AL121757.2-201ENST00000611223 313 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 MIR7106-201ENST00000612419 65 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 AL359314.1-201ENST00000616913 261 ntBASIC2.12□□□□□ -2.07
SCN1BQ07699 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SCN1BQ07699 AC092268.1-201ENST00000342691 405 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 RNU4-75P-201ENST00000364621 146 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 SNORA51.11-201ENST00000384442 131 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 MIR23A-201ENST00000385245 73 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 SNORA26.3-201ENST00000391119 136 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 AL445529.1-201ENST00000398713 389 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 U3.40-201ENST00000408706 208 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.11□□□□□ -2.07
SCN1BQ07699 MTND1P23-201ENST00000416931 372 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 AC078809.1-201ENST00000427601 140 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 AL133396.1-201ENST00000432048 687 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 AC107083.1-201ENST00000439643 279 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.11□□□□□ -2.07
SCN1BQ07699 RPS27P21-201ENST00000486977 252 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 Y_RNA.654-201ENST00000497848 106 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.11□□□□□ -2.07
SCN1BQ07699 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.11□□□□□ -2.07
SCN1BQ07699 RNU6-1069P-201ENST00000516612 133 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 Y_RNA.693-201ENST00000516641 110 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 HSPE1P18-201ENST00000517602 280 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 AP005660.1-201ENST00000522972 293 ntBASIC2.11□□□□□ -2.07
SCN1BQ07699 AC104576.1-201ENST00000524225 88 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms