Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 SNORA25.17-201ENST00000517184 124 ntBASIC2.54□□□□□ -2
CALD1Q05682 RNU6-586P-201ENST00000517265 104 ntBASIC2.54□□□□□ -2
CALD1Q05682 IMMP1LP2-201ENST00000552954 492 ntBASIC2.54□□□□□ -2
CALD1Q05682 AC008121.3-201ENST00000618726 433 ntBASIC2.54□□□□□ -2
CALD1Q05682 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.53□□□□□ -2
CALD1Q05682 RNU6-428P-201ENST00000362942 107 ntBASIC2.53□□□□□ -2
CALD1Q05682 RNU6-1210P-201ENST00000363775 107 ntBASIC2.53□□□□□ -2
CALD1Q05682 RNU6-105P-201ENST00000363909 104 ntBASIC2.53□□□□□ -2
CALD1Q05682 Y_RNA.409-201ENST00000383990 98 ntBASIC2.53□□□□□ -2
CALD1Q05682 RNU2-66P-201ENST00000410650 161 ntBASIC2.53□□□□□ -2
CALD1Q05682 AL663109.1-201ENST00000411498 844 ntBASIC2.53□□□□□ -2
CALD1Q05682 SNORD56-201ENST00000413522 71 ntBASIC2.53□□□□□ -2
CALD1Q05682 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.53□□□□□ -2
CALD1Q05682 AL121890.1-201ENST00000435457 205 ntBASIC2.53□□□□□ -2
CALD1Q05682 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.53□□□□□ -2
CALD1Q05682 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.53□□□□□ -2
CALD1Q05682 MTATP6P26-201ENST00000445926 662 ntBASIC2.53□□□□□ -2
CALD1Q05682 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.53□□□□□ -2
CALD1Q05682 RNU7-180P-201ENST00000459240 63 ntBASIC2.53□□□□□ -2
CALD1Q05682 SNORA4.4-201ENST00000515921 135 ntBASIC2.53□□□□□ -2
CALD1Q05682 RNA5SP182-201ENST00000516064 82 ntBASIC2.53□□□□□ -2
CALD1Q05682 RNU7-193P-201ENST00000516723 65 ntBASIC2.53□□□□□ -2
CALD1Q05682 AP001893.2-201ENST00000526949 202 ntBASIC2.53□□□□□ -2
CALD1Q05682 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.53□□□□□ -2
CALD1Q05682 AC022880.1-201ENST00000534017 973 ntBASIC2.53□□□□□ -2
CALD1Q05682 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.53□□□□□ -2
CALD1Q05682 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.53□□□□□ -2
CALD1Q05682 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.53□□□□□ -2
CALD1Q05682 MIR3935-201ENST00000583472 104 ntBASIC2.53□□□□□ -2
CALD1Q05682 Z99129.1-201ENST00000612510 255 ntBASIC2.53□□□□□ -2
CALD1Q05682 AC022202.1-201ENST00000613515 211 ntBASIC2.53□□□□□ -2
CALD1Q05682 AC139792.3-201ENST00000623525 224 ntBASIC2.53□□□□□ -2
CALD1Q05682 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CALD1Q05682 MTND5P26-201ENST00000426018 1752 ntBASIC2.52□□□□□ -2.01
CALD1Q05682 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CALD1Q05682 RNU6-1042P-201ENST00000384204 107 ntBASIC2.52□□□□□ -2.01
CALD1Q05682 Y_RNA.480-201ENST00000384364 102 ntBASIC2.52□□□□□ -2.01
CALD1Q05682 RNU6-1274P-201ENST00000384557 107 ntBASIC2.52□□□□□ -2.01
CALD1Q05682 MIR544A-201ENST00000384855 91 ntBASIC2.52□□□□□ -2.01
CALD1Q05682 RPL39P29-201ENST00000447779 157 ntBASIC2.52□□□□□ -2.01
CALD1Q05682 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.52□□□□□ -2.01
CALD1Q05682 AL163973.1-201ENST00000484753 577 ntBASIC2.52□□□□□ -2.01
CALD1Q05682 CCDC34P1-201ENST00000507441 517 ntBASIC2.52□□□□□ -2.01
CALD1Q05682 RNU6-377P-201ENST00000515965 102 ntBASIC2.52□□□□□ -2.01
CALD1Q05682 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.52□□□□□ -2.01
CALD1Q05682 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.52□□□□□ -2.01
CALD1Q05682 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.52□□□□□ -2.01
CALD1Q05682 MTCO3P23-201ENST00000561363 289 ntBASIC2.52□□□□□ -2.01
CALD1Q05682 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.52□□□□□ -2.01
CALD1Q05682 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.52□□□□□ -2.01
CALD1Q05682 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.52□□□□□ -2.01
CALD1Q05682 AL670379.2-201ENST00000604983 252 ntBASIC2.52□□□□□ -2.01
CALD1Q05682 AC245008.1-201ENST00000608123 476 ntBASIC2.52□□□□□ -2.01
CALD1Q05682 uc_338.34-201ENST00000617467 174 ntBASIC2.52□□□□□ -2.01
CALD1Q05682 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.52□□□□□ -2.01
CALD1Q05682 AC007792.1-201ENST00000623023 402 ntBASIC2.52□□□□□ -2.01
CALD1Q05682 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.52□□□□□ -2.01
CALD1Q05682 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CALD1Q05682 AC002543.1-201ENST00000299783 1954 ntBASIC2.52□□□□□ -2.01
CALD1Q05682 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.52□□□□□ -2.01
CALD1Q05682 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.51□□□□□ -2.01
CALD1Q05682 snoU2_19.1-201ENST00000362361 80 ntBASIC2.51□□□□□ -2.01
CALD1Q05682 MIR1261-201ENST00000408659 82 ntBASIC2.51□□□□□ -2.01
CALD1Q05682 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.51□□□□□ -2.01
CALD1Q05682 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.51□□□□□ -2.01
CALD1Q05682 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.51□□□□□ -2.01
CALD1Q05682 AL031274.1-201ENST00000450334 232 ntBASIC2.51□□□□□ -2.01
CALD1Q05682 AL353752.1-201ENST00000454946 260 ntBASIC2.51□□□□□ -2.01
CALD1Q05682 AL122001.1-201ENST00000457027 370 ntBASIC2.51□□□□□ -2.01
CALD1Q05682 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.51□□□□□ -2.01
CALD1Q05682 snoU13.14-201ENST00000459372 104 ntBASIC2.51□□□□□ -2.01
CALD1Q05682 AC018868.1-201ENST00000491307 315 ntBASIC2.51□□□□□ -2.01
CALD1Q05682 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.51□□□□□ -2.01
CALD1Q05682 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.51□□□□□ -2.01
CALD1Q05682 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.51□□□□□ -2.01
CALD1Q05682 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.51□□□□□ -2.01
CALD1Q05682 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.51□□□□□ -2.01
CALD1Q05682 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.51□□□□□ -2.01
CALD1Q05682 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.51□□□□□ -2.01
CALD1Q05682 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.51□□□□□ -2.01
CALD1Q05682 AC118273.2-201ENST00000532092 465 ntBASIC2.51□□□□□ -2.01
CALD1Q05682 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.51□□□□□ -2.01
CALD1Q05682 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.51□□□□□ -2.01
CALD1Q05682 AC008749.1-201ENST00000597650 306 ntBASIC2.51□□□□□ -2.01
CALD1Q05682 Z82243.1-201ENST00000609432 473 ntBASIC2.51□□□□□ -2.01
CALD1Q05682 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CALD1Q05682 AL162373.1-201ENST00000620433 407 ntBASIC2.51□□□□□ -2.01
CALD1Q05682 SDR42E1P4-201ENST00000620894 481 ntBASIC2.51□□□□□ -2.01
CALD1Q05682 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CALD1Q05682 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.5□□□□□ -2.01
CALD1Q05682 RNU6-336P-201ENST00000364891 107 ntBASIC2.5□□□□□ -2.01
CALD1Q05682 SNORA25B-201ENST00000365507 128 ntBASIC2.5□□□□□ -2.01
CALD1Q05682 Y_RNA.399-201ENST00000383955 105 ntBASIC2.5□□□□□ -2.01
CALD1Q05682 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CALD1Q05682 AL606923.1-201ENST00000406616 190 ntBASIC2.5□□□□□ -2.01
CALD1Q05682 RNU6-293P-201ENST00000411259 106 ntBASIC2.5□□□□□ -2.01
CALD1Q05682 RNA5SP270-201ENST00000411361 118 ntBASIC2.5□□□□□ -2.01
CALD1Q05682 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.5□□□□□ -2.01
CALD1Q05682 FDX1P2-201ENST00000450769 375 ntBASIC2.5□□□□□ -2.01
CALD1Q05682 MTCO2P18-201ENST00000457151 658 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms