Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 SUB1P3-201ENST00000564581 315 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 AC026271.5-201ENST00000577873 130 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 MIR5089-201ENST00000580047 84 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 MIR3683-201ENST00000580847 82 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 RN7SKP299-201ENST00000606679 301 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 AC084768.2-201ENST00000622736 221 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 AC090582.1-201ENST00000636321 199 ntBASIC1.94□□□□□ -2.1
CSTF1Q05048 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CSTF1Q05048 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.94□□□□□ -2.1
CSTF1Q05048 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.94□□□□□ -2.1
CSTF1Q05048 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.93□□□□□ -2.1
CSTF1Q05048 MTND5P17-201ENST00000418405 1603 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 RNU6-1010P-201ENST00000362757 107 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 RNU6-743P-201ENST00000364151 106 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 Y_RNA.436-201ENST00000384097 102 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 RNU6-1029P-201ENST00000384109 107 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 RNU6-45P-201ENST00000384471 107 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 RNU2-9P-201ENST00000410194 145 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 RNU2-40P-201ENST00000410833 196 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.93□□□□□ -2.1
CSTF1Q05048 RNU7-182P-201ENST00000459009 62 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 RNA5SP269-201ENST00000459032 137 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.93□□□□□ -2.1
CSTF1Q05048 AP001025.1-201ENST00000486139 332 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 MTCO3P7-201ENST00000510008 774 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 AC079140.3-201ENST00000511111 550 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 AC074344.1-201ENST00000512823 224 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 MTCO3P28-201ENST00000513351 515 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.93□□□□□ -2.1
CSTF1Q05048 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.93□□□□□ -2.1
CSTF1Q05048 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.93□□□□□ -2.1
CSTF1Q05048 AC034114.1-201ENST00000520293 285 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.93□□□□□ -2.1
CSTF1Q05048 AC004223.2-201ENST00000590309 544 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.93□□□□□ -2.1
CSTF1Q05048 ELOCP5-201ENST00000604924 333 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 AC103591.3-201ENST00000608684 209 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.93□□□□□ -2.1
CSTF1Q05048 SEPT14P19-203ENST00000633205 211 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 KPNA2P1-201ENST00000458289 1591 ntBASIC1.93□□□□□ -2.1
CSTF1Q05048 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
CSTF1Q05048 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
CSTF1Q05048 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CSTF1Q05048 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.92□□□□□ -2.1
CSTF1Q05048 CENPCP1-201ENST00000533085 2578 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 RNU6-78P-201ENST00000362897 107 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 Y_RNA.77-201ENST00000362962 107 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 RNU6-715P-201ENST00000365204 103 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 RNU6-622P-201ENST00000384272 103 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 MIR95-201ENST00000385072 81 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 MTND3P17-201ENST00000416968 344 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 MTCO2P34-201ENST00000421994 607 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 MTCYBP5-201ENST00000423752 1135 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.92□□□□□ -2.1
CSTF1Q05048 AL358934.1-201ENST00000432346 324 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 AL591043.1-201ENST00000432461 424 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.92□□□□□ -2.1
CSTF1Q05048 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.92□□□□□ -2.1
CSTF1Q05048 AC079448.1-201ENST00000449377 373 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 AC025033.1-201ENST00000463883 194 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 RNU6-965P-201ENST00000516721 96 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 RNU6-667P-201ENST00000517186 102 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 AP001893.2-201ENST00000526949 202 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 ANP32BP3-201ENST00000559213 706 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 MTND1P15-201ENST00000579262 949 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 AC090897.2-201ENST00000581715 130 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 AC008749.1-201ENST00000597650 306 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 AC007792.1-201ENST00000623023 402 ntBASIC1.92□□□□□ -2.1
CSTF1Q05048 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.92□□□□□ -2.1
CSTF1Q05048 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CSTF1Q05048 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CSTF1Q05048 Y_RNA.41-201ENST00000362646 102 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU6-37P-201ENST00000362692 107 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU6-11P-201ENST00000364234 107 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU6-1303P-201ENST00000364841 107 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU6-25P-201ENST00000383873 107 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU6-1-201ENST00000383898 107 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU6-48P-201ENST00000384161 107 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU6-36P-201ENST00000384172 107 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU6-4P-201ENST00000384205 107 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU6-74P-201ENST00000384235 107 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU6-5P-201ENST00000384238 107 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU6-3P-201ENST00000384314 107 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU6-16P-201ENST00000384385 107 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU6-15P-201ENST00000384534 107 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU6-1274P-201ENST00000384557 107 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU6-2-201ENST00000384627 107 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU6-29P-201ENST00000384637 107 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU6-9-201ENST00000384776 107 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU6-33P-201ENST00000384793 107 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 MIR454-201ENST00000390180 115 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CSTF1Q05048 AL512604.1-201ENST00000404812 257 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 RNU2-20P-201ENST00000410425 191 ntBASIC1.91□□□□□ -2.1
CSTF1Q05048 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.91□□□□□ -2.1
CSTF1Q05048 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.91□□□□□ -2.1
CSTF1Q05048 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms