Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
H3F3AP84243 BTF3L4P1-201ENST00000413813 468 ntBASIC0.73□□□□□ -2.29
H3F3AP84243 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.73□□□□□ -2.29
H3F3AP84243 AL117351.1-201ENST00000438864 766 ntBASIC0.73□□□□□ -2.29
H3F3AP84243 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.73□□□□□ -2.29
H3F3AP84243 SNORD60.2-201ENST00000516883 86 ntBASIC0.73□□□□□ -2.29
H3F3AP84243 RNA5SP503-201ENST00000517047 117 ntBASIC0.73□□□□□ -2.29
H3F3AP84243 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.73□□□□□ -2.29
H3F3AP84243 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.73□□□□□ -2.29
H3F3AP84243 CBX3P8-201ENST00000532412 525 ntBASIC0.73□□□□□ -2.29
H3F3AP84243 MIR4698-201ENST00000577795 80 ntBASIC0.73□□□□□ -2.29
H3F3AP84243 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.73□□□□□ -2.29
H3F3AP84243 AC211469.2-201ENST00000605461 205 ntBASIC0.73□□□□□ -2.29
H3F3AP84243 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.73□□□□□ -2.29
H3F3AP84243 OR4G3P-201ENST00000633500 913 ntBASIC0.73□□□□□ -2.29
H3F3AP84243 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
H3F3AP84243 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
H3F3AP84243 RNU6-621P-201ENST00000364752 109 ntBASIC0.72□□□□□ -2.29
H3F3AP84243 MIR146A-201ENST00000385201 99 ntBASIC0.72□□□□□ -2.29
H3F3AP84243 SNORA12-201ENST00000391162 147 ntBASIC0.72□□□□□ -2.29
H3F3AP84243 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.72□□□□□ -2.29
H3F3AP84243 RN7SKP61-201ENST00000410642 295 ntBASIC0.72□□□□□ -2.29
H3F3AP84243 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.72□□□□□ -2.29
H3F3AP84243 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.72□□□□□ -2.29
H3F3AP84243 RPS25P9-201ENST00000435591 252 ntBASIC0.72□□□□□ -2.29
H3F3AP84243 RPL31P3-201ENST00000458430 332 ntBASIC0.72□□□□□ -2.29
H3F3AP84243 AC112198.4-201ENST00000515450 351 ntBASIC0.72□□□□□ -2.29
H3F3AP84243 Y_RNA.689-201ENST00000516589 107 ntBASIC0.72□□□□□ -2.29
H3F3AP84243 CYCSP23-201ENST00000519781 313 ntBASIC0.72□□□□□ -2.29
H3F3AP84243 LRRC6P1-201ENST00000532188 885 ntBASIC0.72□□□□□ -2.29
H3F3AP84243 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.72□□□□□ -2.29
H3F3AP84243 BNIP3P6-201ENST00000549284 499 ntBASIC0.72□□□□□ -2.29
H3F3AP84243 MIR4661-201ENST00000582720 75 ntBASIC0.72□□□□□ -2.29
H3F3AP84243 AL138889.2-201ENST00000603883 242 ntBASIC0.72□□□□□ -2.29
H3F3AP84243 AL136363.2-201ENST00000604173 851 ntBASIC0.72□□□□□ -2.29
H3F3AP84243 AL022154.1-201ENST00000604698 785 ntBASIC0.72□□□□□ -2.29
H3F3AP84243 MIR340-201ENST00000362125 95 ntBASIC0.71□□□□□ -2.3
H3F3AP84243 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.71□□□□□ -2.3
H3F3AP84243 POLR2J4-204ENST00000418424 324 ntBASIC0.71□□□□□ -2.3
H3F3AP84243 AC013410.2-201ENST00000422627 201 ntBASIC0.71□□□□□ -2.3
H3F3AP84243 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.71□□□□□ -2.3
H3F3AP84243 AC245047.4-201ENST00000433189 144 ntBASIC0.71□□□□□ -2.3
H3F3AP84243 MTND1P30-201ENST00000441241 901 ntBASIC0.71□□□□□ -2.3
H3F3AP84243 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.71□□□□□ -2.3
H3F3AP84243 SNRPEP8-201ENST00000442866 260 ntBASIC0.71□□□□□ -2.3
H3F3AP84243 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.71□□□□□ -2.3
H3F3AP84243 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.71□□□□□ -2.3
H3F3AP84243 ATP5EP1-201ENST00000510257 156 ntBASIC0.71□□□□□ -2.3
H3F3AP84243 AC079140.3-201ENST00000511111 550 ntBASIC0.71□□□□□ -2.3
H3F3AP84243 AC112206.3-201ENST00000514578 389 ntBASIC0.71□□□□□ -2.3
H3F3AP84243 RNA5SP216-201ENST00000516111 123 ntBASIC0.71□□□□□ -2.3
H3F3AP84243 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.71□□□□□ -2.3
H3F3AP84243 AC008088.1-201ENST00000580993 280 ntBASIC0.71□□□□□ -2.3
H3F3AP84243 AC008507.2-201ENST00000588402 1176 ntBASIC0.71□□□□□ -2.3
H3F3AP84243 AL596327.1-201ENST00000603629 213 ntBASIC0.71□□□□□ -2.3
H3F3AP84243 RNU6-87P-201ENST00000607561 108 ntBASIC0.71□□□□□ -2.3
H3F3AP84243 AL512506.1-201ENST00000613918 449 ntBASIC0.71□□□□□ -2.3
H3F3AP84243 U6.42-201ENST00000618440 107 ntBASIC0.71□□□□□ -2.3
H3F3AP84243 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
H3F3AP84243 OR4G1P-203ENST00000641984 1631 ntBASIC0.71□□□□□ -2.3
H3F3AP84243 RNU6-560P-201ENST00000364007 108 ntBASIC0.7□□□□□ -2.3
H3F3AP84243 SNORD32B-201ENST00000364460 84 ntBASIC0.7□□□□□ -2.3
H3F3AP84243 RNY3P13-201ENST00000365542 102 ntBASIC0.7□□□□□ -2.3
H3F3AP84243 RNU6-946P-201ENST00000383878 107 ntBASIC0.7□□□□□ -2.3
H3F3AP84243 MTCO3P41-201ENST00000414801 328 ntBASIC0.7□□□□□ -2.3
H3F3AP84243 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.7□□□□□ -2.3
H3F3AP84243 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.7□□□□□ -2.3
H3F3AP84243 AC004941.2-201ENST00000427009 228 ntBASIC0.7□□□□□ -2.3
H3F3AP84243 TAF9P1-201ENST00000445421 515 ntBASIC0.7□□□□□ -2.3
H3F3AP84243 RPS4XP11-201ENST00000446897 772 ntBASIC0.7□□□□□ -2.3
H3F3AP84243 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.7□□□□□ -2.3
H3F3AP84243 NDUFB1P2-201ENST00000449477 176 ntBASIC0.7□□□□□ -2.3
H3F3AP84243 TAF9P2-201ENST00000454958 515 ntBASIC0.7□□□□□ -2.3
H3F3AP84243 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.7□□□□□ -2.3
H3F3AP84243 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.7□□□□□ -2.3
H3F3AP84243 KC877982.1-201ENST00000602313 470 ntBASIC0.7□□□□□ -2.3
H3F3AP84243 AL353778.1-201ENST00000603149 408 ntBASIC0.7□□□□□ -2.3
H3F3AP84243 AC174048.1-201ENST00000603389 144 ntBASIC0.7□□□□□ -2.3
H3F3AP84243 AC108706.1-201ENST00000611053 297 ntBASIC0.7□□□□□ -2.3
H3F3AP84243 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.7□□□□□ -2.3
H3F3AP84243 AL512427.1-201ENST00000618593 349 ntBASIC0.7□□□□□ -2.3
H3F3AP84243 AC091948.2-201ENST00000636510 279 ntBASIC0.7□□□□□ -2.3
H3F3AP84243 AC068647.2-201ENST00000637380 353 ntBASIC0.7□□□□□ -2.3
H3F3AP84243 RNU6-462P-201ENST00000362659 105 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 SNORA25.9-201ENST00000365087 128 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 MIR194-1-201ENST00000384892 85 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 MIR100-201ENST00000385259 80 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 PIGFP2-201ENST00000421400 651 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 AC099677.2-201ENST00000436385 175 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 ART2BP-201ENST00000453501 499 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.69□□□□□ -2.3
H3F3AP84243 HMGN2P9-201ENST00000476875 229 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 AC103851.1-201ENST00000506833 274 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 AC109445.1-201ENST00000512356 383 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.69□□□□□ -2.3
H3F3AP84243 AC109446.2-201ENST00000567872 497 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 MIR3664-201ENST00000579074 99 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 AP005136.1-201ENST00000579765 429 ntBASIC0.69□□□□□ -2.3
H3F3AP84243 MIR3976-201ENST00000606807 139 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms