Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.88□□□□□ -1.95
RAE1P78406 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.88□□□□□ -1.95
RAE1P78406 AL355877.2-201ENST00000603670 358 ntBASIC2.88□□□□□ -1.95
RAE1P78406 AL360085.1-201ENST00000604713 532 ntBASIC2.88□□□□□ -1.95
RAE1P78406 AL355802.3-201ENST00000607571 545 ntBASIC2.88□□□□□ -1.95
RAE1P78406 MIR6075-201ENST00000620782 95 ntBASIC2.88□□□□□ -1.95
RAE1P78406 AC002543.1-201ENST00000299783 1954 ntBASIC2.88□□□□□ -1.95
RAE1P78406 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RAE1P78406 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.88□□□□□ -1.95
RAE1P78406 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RAE1P78406 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
RAE1P78406 RNU6-1286P-201ENST00000383871 107 ntBASIC2.87□□□□□ -1.95
RAE1P78406 RNU6-968P-201ENST00000384076 107 ntBASIC2.87□□□□□ -1.95
RAE1P78406 RNU6-700P-201ENST00000391043 107 ntBASIC2.87□□□□□ -1.95
RAE1P78406 RNA5SP274-201ENST00000410484 108 ntBASIC2.87□□□□□ -1.95
RAE1P78406 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.87□□□□□ -1.95
RAE1P78406 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.87□□□□□ -1.95
RAE1P78406 MTCYBP10-201ENST00000424905 650 ntBASIC2.87□□□□□ -1.95
RAE1P78406 AC004383.1-201ENST00000438135 289 ntBASIC2.87□□□□□ -1.95
RAE1P78406 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.87□□□□□ -1.95
RAE1P78406 RN7SKP210-201ENST00000459176 261 ntBASIC2.87□□□□□ -1.95
RAE1P78406 RN7SL633P-201ENST00000488974 297 ntBASIC2.87□□□□□ -1.95
RAE1P78406 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.87□□□□□ -1.95
RAE1P78406 GZMAP1-201ENST00000503054 631 ntBASIC2.87□□□□□ -1.95
RAE1P78406 AC105758.1-201ENST00000506038 399 ntBASIC2.87□□□□□ -1.95
RAE1P78406 SNORA25.10-201ENST00000515926 124 ntBASIC2.87□□□□□ -1.95
RAE1P78406 RNU7-4P-201ENST00000516961 62 ntBASIC2.87□□□□□ -1.95
RAE1P78406 AL590705.4-201ENST00000532209 134 ntBASIC2.87□□□□□ -1.95
RAE1P78406 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.87□□□□□ -1.95
RAE1P78406 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.87□□□□□ -1.95
RAE1P78406 RPS15AP11-201ENST00000594193 385 ntBASIC2.87□□□□□ -1.95
RAE1P78406 AC012493.2-201ENST00000595083 291 ntBASIC2.87□□□□□ -1.95
RAE1P78406 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.87□□□□□ -1.95
RAE1P78406 AC107294.3-201ENST00000609211 526 ntBASIC2.87□□□□□ -1.95
RAE1P78406 AC006157.1-201ENST00000611750 366 ntBASIC2.87□□□□□ -1.95
RAE1P78406 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.87□□□□□ -1.95
RAE1P78406 AC007485.1-201ENST00000616755 206 ntBASIC2.87□□□□□ -1.95
RAE1P78406 SNORA43.4-201ENST00000629559 138 ntBASIC2.87□□□□□ -1.95
RAE1P78406 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RAE1P78406 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
RAE1P78406 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RAE1P78406 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
RAE1P78406 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RAE1P78406 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.86□□□□□ -1.95
RAE1P78406 AC233981.2-201ENST00000611524 1614 ntBASIC2.86□□□□□ -1.95
RAE1P78406 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RAE1P78406 AP000560.1-201ENST00000624150 1937 ntBASIC2.86□□□□□ -1.95
RAE1P78406 MIR22-201ENST00000362190 85 ntBASIC2.86□□□□□ -1.95
RAE1P78406 Y_RNA.80-201ENST00000362996 102 ntBASIC2.86□□□□□ -1.95
RAE1P78406 RNA5SP139-201ENST00000364340 117 ntBASIC2.86□□□□□ -1.95
RAE1P78406 RNA5SP72-201ENST00000364442 117 ntBASIC2.86□□□□□ -1.95
RAE1P78406 SNORA63C-201ENST00000364578 129 ntBASIC2.86□□□□□ -1.95
RAE1P78406 Y_RNA.364-201ENST00000365532 101 ntBASIC2.86□□□□□ -1.95
RAE1P78406 RNU6-738P-201ENST00000384531 106 ntBASIC2.86□□□□□ -1.95
RAE1P78406 U3.19-201ENST00000390893 196 ntBASIC2.86□□□□□ -1.95
RAE1P78406 RNA5SP171-201ENST00000391071 115 ntBASIC2.86□□□□□ -1.95
RAE1P78406 RNA5SP354-201ENST00000391247 136 ntBASIC2.86□□□□□ -1.95
RAE1P78406 SAR1AP2-201ENST00000392696 594 ntBASIC2.86□□□□□ -1.95
RAE1P78406 EI24P2-201ENST00000397776 1076 ntBASIC2.86□□□□□ -1.95
RAE1P78406 MTCYBP2-201ENST00000407745 171 ntBASIC2.86□□□□□ -1.95
RAE1P78406 CYCSP48-201ENST00000417124 323 ntBASIC2.86□□□□□ -1.95
RAE1P78406 AL358453.1-201ENST00000422522 250 ntBASIC2.86□□□□□ -1.95
RAE1P78406 MTND2P23-201ENST00000422990 651 ntBASIC2.86□□□□□ -1.95
RAE1P78406 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RAE1P78406 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.86□□□□□ -1.95
RAE1P78406 RPL39P29-201ENST00000447779 157 ntBASIC2.86□□□□□ -1.95
RAE1P78406 AL358232.1-201ENST00000448030 501 ntBASIC2.86□□□□□ -1.95
RAE1P78406 AC117440.1-201ENST00000474107 571 ntBASIC2.86□□□□□ -1.95
RAE1P78406 RPL21P129-201ENST00000491732 478 ntBASIC2.86□□□□□ -1.95
RAE1P78406 AC006445.1-201ENST00000491925 405 ntBASIC2.86□□□□□ -1.95
RAE1P78406 AC016632.1-201ENST00000503994 196 ntBASIC2.86□□□□□ -1.95
RAE1P78406 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.86□□□□□ -1.95
RAE1P78406 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.86□□□□□ -1.95
RAE1P78406 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.86□□□□□ -1.95
RAE1P78406 GNAI2P1-201ENST00000541815 315 ntBASIC2.86□□□□□ -1.95
RAE1P78406 DNAJC8P1-201ENST00000554535 372 ntBASIC2.86□□□□□ -1.95
RAE1P78406 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.86□□□□□ -1.95
RAE1P78406 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.86□□□□□ -1.95
RAE1P78406 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.86□□□□□ -1.95
RAE1P78406 MIR1254-2-201ENST00000579553 63 ntBASIC2.86□□□□□ -1.95
RAE1P78406 AL133393.1-201ENST00000603277 287 ntBASIC2.86□□□□□ -1.95
RAE1P78406 AC092447.9-201ENST00000603395 144 ntBASIC2.86□□□□□ -1.95
RAE1P78406 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.86□□□□□ -1.95
RAE1P78406 YPEL5P2-201ENST00000605553 359 ntBASIC2.86□□□□□ -1.95
RAE1P78406 AC096772.1-201ENST00000609146 564 ntBASIC2.86□□□□□ -1.95
RAE1P78406 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.86□□□□□ -1.95
RAE1P78406 SCARNA4-201ENST00000629045 128 ntBASIC2.86□□□□□ -1.95
RAE1P78406 AC110079.1-202ENST00000635213 138 ntBASIC2.86□□□□□ -1.95
RAE1P78406 AL079305.1-201ENST00000623159 3008 ntBASIC2.86□□□□□ -1.95
RAE1P78406 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.86□□□□□ -1.95
RAE1P78406 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.86□□□□□ -1.95
RAE1P78406 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RAE1P78406 MTND5P27-201ENST00000428871 1720 ntBASIC2.85□□□□□ -1.95
RAE1P78406 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
RAE1P78406 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.85□□□□□ -1.95
RAE1P78406 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
RAE1P78406 RNU4-9P-201ENST00000364951 139 ntBASIC2.85□□□□□ -1.95
RAE1P78406 Y_RNA.314-201ENST00000365114 102 ntBASIC2.85□□□□□ -1.95
RAE1P78406 RNU6-142P-201ENST00000384019 107 ntBASIC2.85□□□□□ -1.95
RAE1P78406 MIR625-201ENST00000385047 85 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms