Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CBX3P8-201ENST00000532412 525 ntBASIC0.71□□□□□ -2.3
HIST1H3AP68431 AC008088.1-201ENST00000580993 280 ntBASIC0.71□□□□□ -2.3
HIST1H3AP68431 AC008507.2-201ENST00000588402 1176 ntBASIC0.71□□□□□ -2.3
HIST1H3AP68431 AL596327.1-201ENST00000603629 213 ntBASIC0.71□□□□□ -2.3
HIST1H3AP68431 AC016727.1-205ENST00000605437 569 ntBASIC0.71□□□□□ -2.3
HIST1H3AP68431 AC211469.2-201ENST00000605461 205 ntBASIC0.71□□□□□ -2.3
HIST1H3AP68431 RNU6-87P-201ENST00000607561 108 ntBASIC0.71□□□□□ -2.3
HIST1H3AP68431 AL512506.1-201ENST00000613918 449 ntBASIC0.71□□□□□ -2.3
HIST1H3AP68431 U6.42-201ENST00000618440 107 ntBASIC0.71□□□□□ -2.3
HIST1H3AP68431 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
HIST1H3AP68431 SNORD114-27-201ENST00000363766 70 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 RNU6-560P-201ENST00000364007 108 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 SNORD32B-201ENST00000364460 84 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 Y_RNA.338-201ENST00000365320 114 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 RNY3P13-201ENST00000365542 102 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 RNU6-946P-201ENST00000383878 107 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 MTCO3P41-201ENST00000414801 328 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.7□□□□□ -2.3
HIST1H3AP68431 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.7□□□□□ -2.3
HIST1H3AP68431 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.7□□□□□ -2.3
HIST1H3AP68431 MTND1P18-201ENST00000448191 573 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.7□□□□□ -2.3
HIST1H3AP68431 NDUFB1P2-201ENST00000449477 176 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.7□□□□□ -2.3
HIST1H3AP68431 AC103851.1-201ENST00000506833 274 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 AC034244.1-201ENST00000507687 207 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 AC112198.4-201ENST00000515450 351 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 RNU6-1053P-201ENST00000515930 101 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 RN7SKP265-201ENST00000516448 223 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 MIR4698-201ENST00000577795 80 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.7□□□□□ -2.3
HIST1H3AP68431 KC877982.1-201ENST00000602313 470 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 AL353778.1-201ENST00000603149 408 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 AC174048.1-201ENST00000603389 144 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 AL512427.1-201ENST00000618593 349 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 AC091948.2-201ENST00000636510 279 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 AC068647.2-201ENST00000637380 353 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
HIST1H3AP68431 AC068700.1-201ENST00000565862 3754 ntBASIC0.7□□□□□ -2.3
HIST1H3AP68431 MIR340-201ENST00000362125 95 ntBASIC0.69□□□□□ -2.3
HIST1H3AP68431 MIR96-201ENST00000362288 78 ntBASIC0.69□□□□□ -2.3
HIST1H3AP68431 RNU6-462P-201ENST00000362659 105 ntBASIC0.69□□□□□ -2.3
HIST1H3AP68431 HMGN1P14-201ENST00000412459 517 ntBASIC0.69□□□□□ -2.3
HIST1H3AP68431 PIGFP2-201ENST00000421400 651 ntBASIC0.69□□□□□ -2.3
HIST1H3AP68431 AC013410.2-201ENST00000422627 201 ntBASIC0.69□□□□□ -2.3
HIST1H3AP68431 AC099677.2-201ENST00000436385 175 ntBASIC0.69□□□□□ -2.3
HIST1H3AP68431 RPS4XP11-201ENST00000446897 772 ntBASIC0.69□□□□□ -2.3
HIST1H3AP68431 ART2BP-201ENST00000453501 499 ntBASIC0.69□□□□□ -2.3
HIST1H3AP68431 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.69□□□□□ -2.3
HIST1H3AP68431 HMGN2P9-201ENST00000476875 229 ntBASIC0.69□□□□□ -2.3
HIST1H3AP68431 AC109445.1-201ENST00000512356 383 ntBASIC0.69□□□□□ -2.3
HIST1H3AP68431 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
HIST1H3AP68431 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.69□□□□□ -2.3
HIST1H3AP68431 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.69□□□□□ -2.3
HIST1H3AP68431 MIR3664-201ENST00000579074 99 ntBASIC0.69□□□□□ -2.3
HIST1H3AP68431 MIR3976-201ENST00000606807 139 ntBASIC0.69□□□□□ -2.3
HIST1H3AP68431 AL451064.1-201ENST00000607718 471 ntBASIC0.69□□□□□ -2.3
HIST1H3AP68431 AC040896.1-201ENST00000613819 479 ntBASIC0.69□□□□□ -2.3
HIST1H3AP68431 AC083806.3-201ENST00000614016 455 ntBASIC0.69□□□□□ -2.3
HIST1H3AP68431 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.69□□□□□ -2.3
HIST1H3AP68431 RNU6-862P-201ENST00000362804 105 ntBASIC0.68□□□□□ -2.3
HIST1H3AP68431 RNU1-36P-201ENST00000365130 165 ntBASIC0.68□□□□□ -2.3
HIST1H3AP68431 RNU6-438P-201ENST00000365561 103 ntBASIC0.68□□□□□ -2.3
HIST1H3AP68431 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.68□□□□□ -2.3
HIST1H3AP68431 RNU4-22P-201ENST00000411058 166 ntBASIC0.68□□□□□ -2.3
HIST1H3AP68431 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.68□□□□□ -2.3
HIST1H3AP68431 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
HIST1H3AP68431 MTND1P30-201ENST00000441241 901 ntBASIC0.68□□□□□ -2.3
HIST1H3AP68431 RPL31P3-201ENST00000458430 332 ntBASIC0.68□□□□□ -2.3
HIST1H3AP68431 snoU13.27-201ENST00000459278 104 ntBASIC0.68□□□□□ -2.3
HIST1H3AP68431 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.68□□□□□ -2.3
HIST1H3AP68431 AC021146.8-201ENST00000507455 733 ntBASIC0.68□□□□□ -2.3
HIST1H3AP68431 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.68□□□□□ -2.3
HIST1H3AP68431 AC079395.1-201ENST00000510981 262 ntBASIC0.68□□□□□ -2.3
HIST1H3AP68431 AP003049.1-201ENST00000529418 457 ntBASIC0.68□□□□□ -2.3
HIST1H3AP68431 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.68□□□□□ -2.3
HIST1H3AP68431 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.68□□□□□ -2.3
HIST1H3AP68431 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.68□□□□□ -2.3
HIST1H3AP68431 AC009712.1-201ENST00000564938 316 ntBASIC0.68□□□□□ -2.3
HIST1H3AP68431 AP005136.1-201ENST00000579765 429 ntBASIC0.68□□□□□ -2.3
HIST1H3AP68431 BNIP3P10-201ENST00000605360 577 ntBASIC0.68□□□□□ -2.3
HIST1H3AP68431 RNU6-1019P-201ENST00000364424 107 ntBASIC0.67□□□□□ -2.3
HIST1H3AP68431 RNU1-93P-201ENST00000364704 169 ntBASIC0.67□□□□□ -2.3
HIST1H3AP68431 RNU5E-6P-201ENST00000365574 115 ntBASIC0.67□□□□□ -2.3
HIST1H3AP68431 SNORA18.2-201ENST00000383865 132 ntBASIC0.67□□□□□ -2.3
HIST1H3AP68431 MIR515-2-201ENST00000384883 83 ntBASIC0.67□□□□□ -2.3
HIST1H3AP68431 MIR515-1-201ENST00000384884 83 ntBASIC0.67□□□□□ -2.3
HIST1H3AP68431 MIR100-201ENST00000385259 80 ntBASIC0.67□□□□□ -2.3
HIST1H3AP68431 AL356776.1-201ENST00000406574 447 ntBASIC0.67□□□□□ -2.3
HIST1H3AP68431 RNU2-62P-201ENST00000410868 191 ntBASIC0.67□□□□□ -2.3
HIST1H3AP68431 AC006461.1-201ENST00000412637 326 ntBASIC0.67□□□□□ -2.3
HIST1H3AP68431 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.67□□□□□ -2.3
HIST1H3AP68431 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.67□□□□□ -2.3
HIST1H3AP68431 RPS26P45-201ENST00000471748 340 ntBASIC0.67□□□□□ -2.3
HIST1H3AP68431 AC145146.1-201ENST00000496370 254 ntBASIC0.67□□□□□ -2.3
HIST1H3AP68431 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.67□□□□□ -2.3
HIST1H3AP68431 RNA5SP102-201ENST00000516865 106 ntBASIC0.67□□□□□ -2.3
HIST1H3AP68431 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.67□□□□□ -2.3
HIST1H3AP68431 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms