Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AC244098.2-201ENST00000422068 99 ntBASIC3.89□□□□□ -1.79
ERVFC1P60507 AC005300.1-201ENST00000428401 373 ntBASIC3.89□□□□□ -1.79
ERVFC1P60507 AC096638.1-201ENST00000444678 216 ntBASIC3.89□□□□□ -1.79
ERVFC1P60507 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.89□□□□□ -1.79
ERVFC1P60507 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.89□□□□□ -1.79
ERVFC1P60507 RPS26P15-201ENST00000488067 348 ntBASIC3.89□□□□□ -1.79
ERVFC1P60507 AC139453.3-201ENST00000493276 369 ntBASIC3.89□□□□□ -1.79
ERVFC1P60507 RNU6-1256P-201ENST00000516539 103 ntBASIC3.89□□□□□ -1.79
ERVFC1P60507 AC090877.1-201ENST00000561418 344 ntBASIC3.89□□□□□ -1.79
ERVFC1P60507 AL078605.1-201ENST00000603529 500 ntBASIC3.89□□□□□ -1.79
ERVFC1P60507 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
ERVFC1P60507 AL133383.2-201ENST00000622958 2336 ntBASIC3.89□□□□□ -1.79
ERVFC1P60507 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.89□□□□□ -1.79
ERVFC1P60507 BX322639.1-202ENST00000423987 2213 ntBASIC3.89□□□□□ -1.79
ERVFC1P60507 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
ERVFC1P60507 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ERVFC1P60507 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.88□□□□□ -1.79
ERVFC1P60507 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ERVFC1P60507 MIR410-201ENST00000362222 80 ntBASIC3.88□□□□□ -1.79
ERVFC1P60507 RNU6-137P-201ENST00000363680 108 ntBASIC3.88□□□□□ -1.79
ERVFC1P60507 Y_RNA.230-201ENST00000364348 109 ntBASIC3.88□□□□□ -1.79
ERVFC1P60507 RNU6-741P-201ENST00000383889 107 ntBASIC3.88□□□□□ -1.79
ERVFC1P60507 Y_RNA.570-201ENST00000384750 101 ntBASIC3.88□□□□□ -1.79
ERVFC1P60507 RNU2-51P-201ENST00000410708 197 ntBASIC3.88□□□□□ -1.79
ERVFC1P60507 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.88□□□□□ -1.79
ERVFC1P60507 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.88□□□□□ -1.79
ERVFC1P60507 DBIP2-201ENST00000419076 262 ntBASIC3.88□□□□□ -1.79
ERVFC1P60507 AC005326.1-201ENST00000429197 123 ntBASIC3.88□□□□□ -1.79
ERVFC1P60507 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.88□□□□□ -1.79
ERVFC1P60507 AC091959.1-201ENST00000495857 238 ntBASIC3.88□□□□□ -1.79
ERVFC1P60507 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.88□□□□□ -1.79
ERVFC1P60507 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.88□□□□□ -1.79
ERVFC1P60507 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.88□□□□□ -1.79
ERVFC1P60507 AC110741.2-201ENST00000605278 268 ntBASIC3.88□□□□□ -1.79
ERVFC1P60507 AC090132.2-201ENST00000615881 347 ntBASIC3.88□□□□□ -1.79
ERVFC1P60507 AC073349.3-201ENST00000617616 186 ntBASIC3.88□□□□□ -1.79
ERVFC1P60507 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.88□□□□□ -1.79
ERVFC1P60507 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
ERVFC1P60507 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
ERVFC1P60507 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ERVFC1P60507 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ERVFC1P60507 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.88□□□□□ -1.79
ERVFC1P60507 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
ERVFC1P60507 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ERVFC1P60507 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.87□□□□□ -1.79
ERVFC1P60507 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ERVFC1P60507 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ERVFC1P60507 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
ERVFC1P60507 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ERVFC1P60507 RNU6-629P-201ENST00000384061 103 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 RNU6-514P-201ENST00000384208 107 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 MIR128-1-201ENST00000384921 82 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 MIR32-201ENST00000384965 70 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 Y_RNA.580-201ENST00000391004 95 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 SNORA46.1-201ENST00000391069 153 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 AC017083.1-201ENST00000428093 483 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 AC011742.1-201ENST00000431448 434 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.87□□□□□ -1.79
ERVFC1P60507 AL353705.4-201ENST00000449661 238 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.87□□□□□ -1.79
ERVFC1P60507 HMGN2P7-201ENST00000456186 273 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 AC087477.1-201ENST00000465747 340 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 AP000870.1-201ENST00000472927 406 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 AC025518.1-201ENST00000479856 347 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 RPL30P1-201ENST00000488676 339 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 RNU7-110P-201ENST00000516891 62 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 RN7SKP272-201ENST00000516988 232 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ERVFC1P60507 SNRPGP15-201ENST00000600149 222 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 AC024153.1-201ENST00000603103 365 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.87□□□□□ -1.79
ERVFC1P60507 AP000553.6-201ENST00000641242 118 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 FAM35DP-201ENST00000323387 2712 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 AP001486.2-201ENST00000561652 5113 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ERVFC1P60507 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.87□□□□□ -1.79
ERVFC1P60507 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ERVFC1P60507 AL353743.1-202ENST00000431724 1695 ntBASIC3.87□□□□□ -1.79
ERVFC1P60507 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
ERVFC1P60507 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ERVFC1P60507 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ERVFC1P60507 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.86□□□□□ -1.79
ERVFC1P60507 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ERVFC1P60507 Y_RNA.81-201ENST00000362997 102 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 SNORA7.2-201ENST00000364446 145 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 RNA5SP235-201ENST00000365411 114 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 Y_RNA.446-201ENST00000384178 104 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 RNU6-1289P-201ENST00000384431 106 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 MIR607-201ENST00000385241 96 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 AL138878.1-201ENST00000405131 347 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 RNU2-68P-201ENST00000410878 191 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 RPL23AP36-201ENST00000413895 458 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.86□□□□□ -1.79
ERVFC1P60507 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 RN7SL807P-201ENST00000470923 297 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 AC117440.1-201ENST00000474107 571 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 RPL31P13-201ENST00000484151 370 ntBASIC3.86□□□□□ -1.79
ERVFC1P60507 AP001025.1-201ENST00000486139 332 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms