Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN20P56880 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.52□□□□□ -2.01
CLDN20P56880 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.52□□□□□ -2.01
CLDN20P56880 RNU6-277P-201ENST00000516272 106 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN20P56880 AP005902.1-201ENST00000521358 186 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN20P56880 HPRT1P3-201ENST00000539521 576 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 RAB11AP2-201ENST00000545905 639 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 AC105137.2-201ENST00000569073 466 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN20P56880 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.52□□□□□ -2.01
CLDN20P56880 AL117336.2-201ENST00000602435 335 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 AC113139.1-201ENST00000605049 239 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 AC018889.1-201ENST00000605372 397 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 AC019193.3-201ENST00000609144 554 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 MIR6128-201ENST00000615528 109 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 AC010297.1-201ENST00000623948 149 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 MIR1302-1-201ENST00000637932 143 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.52□□□□□ -2.01
CLDN20P56880 AL359854.1-201ENST00000614203 1594 ntBASIC2.52□□□□□ -2.01
CLDN20P56880 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN20P56880 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN20P56880 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.51□□□□□ -2.01
CLDN20P56880 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CLDN20P56880 RNU6-1010P-201ENST00000362757 107 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 RNU6-227P-201ENST00000362865 103 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 SNORD114-19-201ENST00000363072 75 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 Y_RNA.482-201ENST00000384377 111 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 RNU6-692P-201ENST00000384496 107 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.51□□□□□ -2.01
CLDN20P56880 MTND4P17-201ENST00000470444 350 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 RPL36AP48-201ENST00000485521 314 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 RPL22P13-201ENST00000493291 347 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 PTP4A1P4-201ENST00000512479 322 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 SNORA9.3-201ENST00000516383 129 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 RNU6-1016P-201ENST00000516689 94 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 AC079598.5-201ENST00000547460 117 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 MIR4765-201ENST00000585007 77 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 ELOCP29-201ENST00000588193 334 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 AP001836.1-201ENST00000604675 523 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 AL356157.2-201ENST00000605122 111 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 AC104985.2-201ENST00000620598 500 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 AC112487.2-201ENST00000637950 304 ntBASIC2.51□□□□□ -2.01
CLDN20P56880 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.51□□□□□ -2.01
CLDN20P56880 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLDN20P56880 VTRNA1-1-201ENST00000363120 99 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 SNORA5B-201ENST00000363786 132 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 RNU6-601P-201ENST00000384540 107 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 RNU6-1222P-201ENST00000384615 107 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 MIR544A-201ENST00000384855 91 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 AL138827.1-201ENST00000402666 306 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 RNU6-1140P-201ENST00000410517 106 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 AC138623.1-201ENST00000418060 216 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN20P56880 Z98742.2-201ENST00000431564 187 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN20P56880 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDN20P56880 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN20P56880 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDN20P56880 SNORD5.1-201ENST00000458800 75 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 AC003982.1-202ENST00000469928 248 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN20P56880 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN20P56880 AC109329.1-201ENST00000518744 317 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDN20P56880 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.5□□□□□ -2.01
CLDN20P56880 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDN20P56880 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN20P56880 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.5□□□□□ -2.01
CLDN20P56880 ZNF861P-201ENST00000588126 639 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDN20P56880 AC016727.1-205ENST00000605437 569 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 MIR8076-201ENST00000611401 83 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 AC007792.1-201ENST00000623023 402 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 MIR7515-201ENST00000637837 67 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 AC002543.1-201ENST00000299783 1954 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLDN20P56880 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CLDN20P56880 AC010329.5-201ENST00000623497 2174 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 AC138915.1-201ENST00000565427 1685 ntBASIC2.5□□□□□ -2.01
CLDN20P56880 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLDN20P56880 RNU1-112P-201ENST00000364401 164 ntBASIC2.49□□□□□ -2.01
CLDN20P56880 DEFA7P-201ENST00000382676 285 ntBASIC2.49□□□□□ -2.01
CLDN20P56880 RNU6-306P-201ENST00000384617 107 ntBASIC2.49□□□□□ -2.01
CLDN20P56880 MIR634-201ENST00000385208 97 ntBASIC2.49□□□□□ -2.01
CLDN20P56880 RNU2-23P-201ENST00000410545 195 ntBASIC2.49□□□□□ -2.01
CLDN20P56880 NUP35P1-201ENST00000422734 947 ntBASIC2.49□□□□□ -2.01
CLDN20P56880 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.49□□□□□ -2.01
CLDN20P56880 MTND3P9-201ENST00000429526 346 ntBASIC2.49□□□□□ -2.01
CLDN20P56880 AL133396.1-201ENST00000432048 687 ntBASIC2.49□□□□□ -2.01
CLDN20P56880 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN20P56880 RPL39P29-201ENST00000447779 157 ntBASIC2.49□□□□□ -2.01
CLDN20P56880 AC112771.1-201ENST00000463581 102 ntBASIC2.49□□□□□ -2.01
CLDN20P56880 RPS29P27-201ENST00000463711 170 ntBASIC2.49□□□□□ -2.01
CLDN20P56880 RPL30P12-201ENST00000474666 353 ntBASIC2.49□□□□□ -2.01
CLDN20P56880 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.49□□□□□ -2.01
CLDN20P56880 RNA5SP112-201ENST00000515937 99 ntBASIC2.49□□□□□ -2.01
CLDN20P56880 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms