Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RNU6-1285P-201ENST00000363480 105 ntBASIC1.72□□□□□ -2.13
PKNOX1P55347 RNU6-1222P-201ENST00000384615 107 ntBASIC1.72□□□□□ -2.13
PKNOX1P55347 MIR29B2-201ENST00000385055 81 ntBASIC1.72□□□□□ -2.13
PKNOX1P55347 AL079342.1-201ENST00000401460 267 ntBASIC1.72□□□□□ -2.13
PKNOX1P55347 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.72□□□□□ -2.13
PKNOX1P55347 MTATP6P18-201ENST00000417994 673 ntBASIC1.72□□□□□ -2.13
PKNOX1P55347 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.72□□□□□ -2.13
PKNOX1P55347 AC013470.1-201ENST00000453438 462 ntBASIC1.72□□□□□ -2.13
PKNOX1P55347 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.72□□□□□ -2.13
PKNOX1P55347 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.72□□□□□ -2.13
PKNOX1P55347 SCARNA18-201ENST00000459004 134 ntBASIC1.72□□□□□ -2.13
PKNOX1P55347 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.72□□□□□ -2.13
PKNOX1P55347 AC079382.1-201ENST00000493346 557 ntBASIC1.72□□□□□ -2.13
PKNOX1P55347 ANXA2P1-201ENST00000505539 926 ntBASIC1.72□□□□□ -2.13
PKNOX1P55347 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PKNOX1P55347 AC117532.1-201ENST00000514638 323 ntBASIC1.72□□□□□ -2.13
PKNOX1P55347 RNU5F-2P-201ENST00000516066 82 ntBASIC1.72□□□□□ -2.13
PKNOX1P55347 RNU6-965P-201ENST00000516721 96 ntBASIC1.72□□□□□ -2.13
PKNOX1P55347 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.72□□□□□ -2.13
PKNOX1P55347 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.72□□□□□ -2.13
PKNOX1P55347 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.72□□□□□ -2.13
PKNOX1P55347 MIR5583-1-201ENST00000580941 59 ntBASIC1.72□□□□□ -2.13
PKNOX1P55347 AC002044.1-201ENST00000606707 158 ntBASIC1.72□□□□□ -2.13
PKNOX1P55347 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.72□□□□□ -2.13
PKNOX1P55347 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PKNOX1P55347 AL359314.1-201ENST00000616913 261 ntBASIC1.72□□□□□ -2.13
PKNOX1P55347 MIR3974-201ENST00000637126 96 ntBASIC1.72□□□□□ -2.13
PKNOX1P55347 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
PKNOX1P55347 AP006437.1-201ENST00000641440 3685 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PKNOX1P55347 RNU6-552P-201ENST00000362869 119 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 RNU6-428P-201ENST00000362942 107 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 RNU6-1120P-201ENST00000362988 108 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 RNU6-336P-201ENST00000364891 107 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 RNU6-234P-201ENST00000365229 104 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 RNU6-611P-201ENST00000384276 104 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 RNU6-434P-201ENST00000384376 107 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 MIR29C-201ENST00000385231 88 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
PKNOX1P55347 RNU6-903P-201ENST00000391270 109 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 AC068050.1-201ENST00000394891 380 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 MIR1294-201ENST00000408503 142 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 MIR1283-2-201ENST00000408621 87 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
PKNOX1P55347 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.71□□□□□ -2.14
PKNOX1P55347 AC090960.1-201ENST00000421072 306 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 IFNA20P-201ENST00000436840 528 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.71□□□□□ -2.14
PKNOX1P55347 AL356010.1-201ENST00000456364 102 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 PRELID3BP1-201ENST00000457142 540 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.71□□□□□ -2.14
PKNOX1P55347 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.71□□□□□ -2.14
PKNOX1P55347 RNU6-956P-201ENST00000458868 103 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 UBE2DNL-203ENST00000474922 222 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.71□□□□□ -2.14
PKNOX1P55347 AC009646.1-201ENST00000510455 318 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.71□□□□□ -2.14
PKNOX1P55347 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.71□□□□□ -2.14
PKNOX1P55347 RNU6-377P-201ENST00000515965 102 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.71□□□□□ -2.14
PKNOX1P55347 AC110588.1-201ENST00000559699 137 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.71□□□□□ -2.14
PKNOX1P55347 MIR4299-201ENST00000577899 72 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 MTATP6P3-201ENST00000581686 676 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 AC119751.7-201ENST00000600494 245 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 AL391646.1-201ENST00000603860 190 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 AC087241.4-201ENST00000612441 480 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 AC063943.3-201ENST00000615562 356 ntBASIC1.71□□□□□ -2.14
PKNOX1P55347 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.71□□□□□ -2.14
PKNOX1P55347 SNORD115-3-201ENST00000363100 82 ntBASIC1.7□□□□□ -2.14
PKNOX1P55347 Y_RNA.480-201ENST00000384364 102 ntBASIC1.7□□□□□ -2.14
PKNOX1P55347 RNU6-692P-201ENST00000384496 107 ntBASIC1.7□□□□□ -2.14
PKNOX1P55347 MIR9-3-201ENST00000385084 90 ntBASIC1.7□□□□□ -2.14
PKNOX1P55347 AF228730.1-201ENST00000397972 663 ntBASIC1.7□□□□□ -2.14
PKNOX1P55347 RNU2-29P-201ENST00000410423 189 ntBASIC1.7□□□□□ -2.14
PKNOX1P55347 Y_RNA.597-201ENST00000410463 100 ntBASIC1.7□□□□□ -2.14
PKNOX1P55347 RNU6-293P-201ENST00000411259 106 ntBASIC1.7□□□□□ -2.14
PKNOX1P55347 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.7□□□□□ -2.14
PKNOX1P55347 AL117339.3-201ENST00000418733 162 ntBASIC1.7□□□□□ -2.14
PKNOX1P55347 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.7□□□□□ -2.14
PKNOX1P55347 AC003989.2-201ENST00000440224 169 ntBASIC1.7□□□□□ -2.14
PKNOX1P55347 MTCO1P19-201ENST00000443487 500 ntBASIC1.7□□□□□ -2.14
PKNOX1P55347 FDX1P2-201ENST00000450769 375 ntBASIC1.7□□□□□ -2.14
PKNOX1P55347 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.7□□□□□ -2.14
PKNOX1P55347 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
PKNOX1P55347 AC105417.1-201ENST00000514691 285 ntBASIC1.7□□□□□ -2.14
PKNOX1P55347 AL356057.1-201ENST00000533798 831 ntBASIC1.7□□□□□ -2.14
PKNOX1P55347 AC022880.1-201ENST00000534017 973 ntBASIC1.7□□□□□ -2.14
PKNOX1P55347 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.7□□□□□ -2.14
PKNOX1P55347 AC110760.3-201ENST00000598794 467 ntBASIC1.7□□□□□ -2.14
PKNOX1P55347 AC008536.2-201ENST00000607284 349 ntBASIC1.7□□□□□ -2.14
PKNOX1P55347 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
PKNOX1P55347 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.69□□□□□ -2.14
PKNOX1P55347 RNU6-266P-201ENST00000364225 107 ntBASIC1.69□□□□□ -2.14
PKNOX1P55347 Y_RNA.399-201ENST00000383955 105 ntBASIC1.69□□□□□ -2.14
PKNOX1P55347 Y_RNA.553-201ENST00000384670 102 ntBASIC1.69□□□□□ -2.14
PKNOX1P55347 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.69□□□□□ -2.14
PKNOX1P55347 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.69□□□□□ -2.14
PKNOX1P55347 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.69□□□□□ -2.14
PKNOX1P55347 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms