Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.42□□□□□ -2.02
CDH11P55287 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.42□□□□□ -2.02
CDH11P55287 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.42□□□□□ -2.02
CDH11P55287 MIR4446-201ENST00000578505 67 ntBASIC2.42□□□□□ -2.02
CDH11P55287 MIR3162-201ENST00000581818 82 ntBASIC2.42□□□□□ -2.02
CDH11P55287 MIR4635-201ENST00000583759 79 ntBASIC2.42□□□□□ -2.02
CDH11P55287 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.42□□□□□ -2.02
CDH11P55287 BNIP3P16-201ENST00000589779 534 ntBASIC2.42□□□□□ -2.02
CDH11P55287 uc_338.14-201ENST00000613162 166 ntBASIC2.42□□□□□ -2.02
CDH11P55287 AC025253.1-201ENST00000613623 543 ntBASIC2.42□□□□□ -2.02
CDH11P55287 AC010297.1-201ENST00000623948 149 ntBASIC2.42□□□□□ -2.02
CDH11P55287 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.42□□□□□ -2.02
CDH11P55287 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDH11P55287 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CDH11P55287 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
CDH11P55287 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CDH11P55287 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
CDH11P55287 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.41□□□□□ -2.02
CDH11P55287 MTND4P23-201ENST00000447723 1363 ntBASIC2.41□□□□□ -2.02
CDH11P55287 RNU6-858P-201ENST00000362436 107 ntBASIC2.41□□□□□ -2.02
CDH11P55287 RNU6-859P-201ENST00000362728 107 ntBASIC2.41□□□□□ -2.02
CDH11P55287 SNORD56.1-201ENST00000362913 68 ntBASIC2.41□□□□□ -2.02
CDH11P55287 Y_RNA.263-201ENST00000364659 114 ntBASIC2.41□□□□□ -2.02
CDH11P55287 RNU5E-4P-201ENST00000364931 120 ntBASIC2.41□□□□□ -2.02
CDH11P55287 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CDH11P55287 MIR196B-201ENST00000384852 84 ntBASIC2.41□□□□□ -2.02
CDH11P55287 RNA5SP210-201ENST00000391034 120 ntBASIC2.41□□□□□ -2.02
CDH11P55287 AL138827.1-201ENST00000402666 306 ntBASIC2.41□□□□□ -2.02
CDH11P55287 RN7SKP158-201ENST00000410453 326 ntBASIC2.41□□□□□ -2.02
CDH11P55287 RNU2-41P-201ENST00000410991 178 ntBASIC2.41□□□□□ -2.02
CDH11P55287 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.41□□□□□ -2.02
CDH11P55287 ARL5AP4-201ENST00000430731 512 ntBASIC2.41□□□□□ -2.02
CDH11P55287 AL365400.1-201ENST00000431854 640 ntBASIC2.41□□□□□ -2.02
CDH11P55287 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.41□□□□□ -2.02
CDH11P55287 AC112220.1-201ENST00000434628 355 ntBASIC2.41□□□□□ -2.02
CDH11P55287 RPS3AP52-201ENST00000435639 297 ntBASIC2.41□□□□□ -2.02
CDH11P55287 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.41□□□□□ -2.02
CDH11P55287 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.41□□□□□ -2.02
CDH11P55287 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.41□□□□□ -2.02
CDH11P55287 AP001324.2-201ENST00000461163 319 ntBASIC2.41□□□□□ -2.02
CDH11P55287 SRIP1-201ENST00000489235 288 ntBASIC2.41□□□□□ -2.02
CDH11P55287 PTP4A1P4-201ENST00000512479 322 ntBASIC2.41□□□□□ -2.02
CDH11P55287 RPL39P5-202ENST00000512505 151 ntBASIC2.41□□□□□ -2.02
CDH11P55287 RNU6-277P-201ENST00000516272 106 ntBASIC2.41□□□□□ -2.02
CDH11P55287 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.41□□□□□ -2.02
CDH11P55287 AC079600.2-201ENST00000550076 130 ntBASIC2.41□□□□□ -2.02
CDH11P55287 AC090897.2-201ENST00000581715 130 ntBASIC2.41□□□□□ -2.02
CDH11P55287 POLR3GP2-201ENST00000588366 668 ntBASIC2.41□□□□□ -2.02
CDH11P55287 AC060766.3-201ENST00000591442 263 ntBASIC2.41□□□□□ -2.02
CDH11P55287 AC010620.2-201ENST00000600135 313 ntBASIC2.41□□□□□ -2.02
CDH11P55287 AL133215.3-201ENST00000609801 448 ntBASIC2.41□□□□□ -2.02
CDH11P55287 AL132765.2-201ENST00000610812 351 ntBASIC2.41□□□□□ -2.02
CDH11P55287 AC097372.5-201ENST00000623665 376 ntBASIC2.41□□□□□ -2.02
CDH11P55287 AL109809.4-201ENST00000603520 2185 ntBASIC2.41□□□□□ -2.02
CDH11P55287 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
CDH11P55287 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.4□□□□□ -2.02
CDH11P55287 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.4□□□□□ -2.02
CDH11P55287 RNU6-692P-201ENST00000384496 107 ntBASIC2.4□□□□□ -2.03
CDH11P55287 RNU6-1009P-201ENST00000390996 107 ntBASIC2.4□□□□□ -2.03
CDH11P55287 RNA5SP390-201ENST00000410191 113 ntBASIC2.4□□□□□ -2.03
CDH11P55287 RNU6-1140P-201ENST00000410517 106 ntBASIC2.4□□□□□ -2.03
CDH11P55287 RNU6-325P-201ENST00000411132 105 ntBASIC2.4□□□□□ -2.03
CDH11P55287 RNU6-293P-201ENST00000411259 106 ntBASIC2.4□□□□□ -2.03
CDH11P55287 AL031659.1-201ENST00000447075 539 ntBASIC2.4□□□□□ -2.03
CDH11P55287 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.4□□□□□ -2.03
CDH11P55287 AK3P2-201ENST00000507976 429 ntBASIC2.4□□□□□ -2.03
CDH11P55287 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH11P55287 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.4□□□□□ -2.03
CDH11P55287 MIR4790-201ENST00000577799 79 ntBASIC2.4□□□□□ -2.03
CDH11P55287 AL117336.2-201ENST00000602435 335 ntBASIC2.4□□□□□ -2.03
CDH11P55287 AC009233.1-201ENST00000616477 371 ntBASIC2.4□□□□□ -2.03
CDH11P55287 AL159153.1-201ENST00000619688 317 ntBASIC2.4□□□□□ -2.03
CDH11P55287 AC241585.2-209ENST00000638217 143 ntBASIC2.4□□□□□ -2.03
CDH11P55287 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH11P55287 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDH11P55287 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.39□□□□□ -2.03
CDH11P55287 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CDH11P55287 SNORD62.1-201ENST00000362541 86 ntBASIC2.39□□□□□ -2.03
CDH11P55287 Y_RNA.151-201ENST00000363566 112 ntBASIC2.39□□□□□ -2.03
CDH11P55287 SNORA25.6-201ENST00000364121 118 ntBASIC2.39□□□□□ -2.03
CDH11P55287 RNU6-1317P-201ENST00000364582 104 ntBASIC2.39□□□□□ -2.03
CDH11P55287 SNORD32A-201ENST00000364805 84 ntBASIC2.39□□□□□ -2.03
CDH11P55287 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CDH11P55287 AL133475.1-201ENST00000404414 305 ntBASIC2.39□□□□□ -2.03
CDH11P55287 MIR548F5-201ENST00000408421 86 ntBASIC2.39□□□□□ -2.03
CDH11P55287 RNU4-14P-201ENST00000410858 122 ntBASIC2.39□□□□□ -2.03
CDH11P55287 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.39□□□□□ -2.03
CDH11P55287 RPS15AP10-201ENST00000432472 382 ntBASIC2.39□□□□□ -2.03
CDH11P55287 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH11P55287 FABP5P14-201ENST00000437273 393 ntBASIC2.39□□□□□ -2.03
CDH11P55287 SNRPEP8-201ENST00000442866 260 ntBASIC2.39□□□□□ -2.03
CDH11P55287 AL109933.2-201ENST00000452651 260 ntBASIC2.39□□□□□ -2.03
CDH11P55287 RPL23AP49-201ENST00000492925 468 ntBASIC2.39□□□□□ -2.03
CDH11P55287 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.39□□□□□ -2.03
CDH11P55287 SNORA31.18-201ENST00000517043 134 ntBASIC2.39□□□□□ -2.03
CDH11P55287 RAB11AP2-201ENST00000545905 639 ntBASIC2.39□□□□□ -2.03
CDH11P55287 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH11P55287 RPS3AP23-202ENST00000574601 686 ntBASIC2.39□□□□□ -2.03
CDH11P55287 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH11P55287 RPS15AP11-201ENST00000594193 385 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms