Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MTCYBP40-201ENST00000509390 1135 ntBASIC2.66□□□□□ -1.98
CLCNKAP51800 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.66□□□□□ -1.98
CLCNKAP51800 AC109479.2-201ENST00000517842 174 ntBASIC2.66□□□□□ -1.98
CLCNKAP51800 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.66□□□□□ -1.98
CLCNKAP51800 AP000889.1-201ENST00000530968 660 ntBASIC2.66□□□□□ -1.98
CLCNKAP51800 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.66□□□□□ -1.98
CLCNKAP51800 MIR4672-201ENST00000583126 81 ntBASIC2.66□□□□□ -1.98
CLCNKAP51800 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.66□□□□□ -1.98
CLCNKAP51800 AC006023.1-201ENST00000603944 259 ntBASIC2.66□□□□□ -1.98
CLCNKAP51800 AC091152.3-201ENST00000604227 325 ntBASIC2.66□□□□□ -1.98
CLCNKAP51800 AC005046.1-201ENST00000608515 625 ntBASIC2.66□□□□□ -1.98
CLCNKAP51800 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.66□□□□□ -1.98
CLCNKAP51800 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLCNKAP51800 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.66□□□□□ -1.98
CLCNKAP51800 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CLCNKAP51800 AC010889.1-201ENST00000566193 2666 ntBASIC2.65□□□□□ -1.98
CLCNKAP51800 RNU6-859P-201ENST00000362728 107 ntBASIC2.65□□□□□ -1.99
CLCNKAP51800 RNU6-105P-201ENST00000363909 104 ntBASIC2.65□□□□□ -1.99
CLCNKAP51800 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLCNKAP51800 RNU2-52P-201ENST00000410680 190 ntBASIC2.65□□□□□ -1.99
CLCNKAP51800 RNU6-325P-201ENST00000411132 105 ntBASIC2.65□□□□□ -1.99
CLCNKAP51800 RNU6-1304P-201ENST00000411374 106 ntBASIC2.65□□□□□ -1.99
CLCNKAP51800 AL030996.1-201ENST00000411430 235 ntBASIC2.65□□□□□ -1.99
CLCNKAP51800 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.65□□□□□ -1.99
CLCNKAP51800 AC236972.1-201ENST00000433225 199 ntBASIC2.65□□□□□ -1.99
CLCNKAP51800 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.65□□□□□ -1.99
CLCNKAP51800 AL109933.2-201ENST00000452651 260 ntBASIC2.65□□□□□ -1.99
CLCNKAP51800 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.65□□□□□ -1.99
CLCNKAP51800 Y_RNA.635-201ENST00000459041 101 ntBASIC2.65□□□□□ -1.99
CLCNKAP51800 SNORA59A-201ENST00000459326 152 ntBASIC2.65□□□□□ -1.99
CLCNKAP51800 MED28P2-201ENST00000475771 317 ntBASIC2.65□□□□□ -1.99
CLCNKAP51800 AC090525.1-201ENST00000479116 478 ntBASIC2.65□□□□□ -1.99
CLCNKAP51800 RPL23AP49-201ENST00000492925 468 ntBASIC2.65□□□□□ -1.99
CLCNKAP51800 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.65□□□□□ -1.99
CLCNKAP51800 AC109329.2-201ENST00000519658 482 ntBASIC2.65□□□□□ -1.99
CLCNKAP51800 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.65□□□□□ -1.99
CLCNKAP51800 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.65□□□□□ -1.99
CLCNKAP51800 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.65□□□□□ -1.99
CLCNKAP51800 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.65□□□□□ -1.99
CLCNKAP51800 AC113139.1-201ENST00000605049 239 ntBASIC2.65□□□□□ -1.99
CLCNKAP51800 AL161423.1-201ENST00000613700 262 ntBASIC2.65□□□□□ -1.99
CLCNKAP51800 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.65□□□□□ -1.99
CLCNKAP51800 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
CLCNKAP51800 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLCNKAP51800 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CLCNKAP51800 MTND4P23-201ENST00000447723 1363 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.64□□□□□ -1.99
CLCNKAP51800 AC004944.1-201ENST00000517807 3059 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 SNORD62.1-201ENST00000362541 86 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 RNU6-527P-201ENST00000363425 104 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 RNU6-1317P-201ENST00000364582 104 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 Y_RNA.473-201ENST00000384333 102 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 RNU6-750P-201ENST00000390946 107 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 RNU6-370P-201ENST00000411008 104 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.64□□□□□ -1.99
CLCNKAP51800 SUMO1P4-201ENST00000429430 302 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.64□□□□□ -1.99
CLCNKAP51800 AL645568.3-201ENST00000433683 316 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.64□□□□□ -1.99
CLCNKAP51800 FABP5P14-201ENST00000437273 393 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.64□□□□□ -1.99
CLCNKAP51800 AL445687.1-201ENST00000439946 251 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 AC108938.1-201ENST00000451204 136 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 AC006026.2-201ENST00000457376 180 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 AC008571.1-201ENST00000467232 300 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 MRPS36P2-201ENST00000512569 299 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 RNU6-559P-201ENST00000516151 98 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 RNA5SP282-201ENST00000516355 108 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 IMMP1LP2-201ENST00000552954 492 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.64□□□□□ -1.99
CLCNKAP51800 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.64□□□□□ -1.99
CLCNKAP51800 MIR6852-201ENST00000621699 66 ntBASIC2.64□□□□□ -1.99
CLCNKAP51800 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CLCNKAP51800 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.64□□□□□ -1.99
CLCNKAP51800 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CLCNKAP51800 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.63□□□□□ -1.99
CLCNKAP51800 RNU4-79P-201ENST00000362764 141 ntBASIC2.63□□□□□ -1.99
CLCNKAP51800 SNORD56.1-201ENST00000362913 68 ntBASIC2.63□□□□□ -1.99
CLCNKAP51800 RNU6-461P-201ENST00000364195 107 ntBASIC2.63□□□□□ -1.99
CLCNKAP51800 RNU6-601P-201ENST00000384540 107 ntBASIC2.63□□□□□ -1.99
CLCNKAP51800 RNU6-19P-201ENST00000384718 107 ntBASIC2.63□□□□□ -1.99
CLCNKAP51800 MIR517A-201ENST00000385001 87 ntBASIC2.63□□□□□ -1.99
CLCNKAP51800 AL139095.1-201ENST00000404326 391 ntBASIC2.63□□□□□ -1.99
CLCNKAP51800 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.63□□□□□ -1.99
CLCNKAP51800 PTGES3P4-201ENST00000426243 356 ntBASIC2.63□□□□□ -1.99
CLCNKAP51800 ARL5AP4-201ENST00000430731 512 ntBASIC2.63□□□□□ -1.99
CLCNKAP51800 RPS15AP10-201ENST00000432472 382 ntBASIC2.63□□□□□ -1.99
CLCNKAP51800 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.63□□□□□ -1.99
CLCNKAP51800 Y_RNA.632-201ENST00000459189 102 ntBASIC2.63□□□□□ -1.99
CLCNKAP51800 RNU6-1037P-201ENST00000459571 107 ntBASIC2.63□□□□□ -1.99
CLCNKAP51800 AC116337.1-201ENST00000509680 687 ntBASIC2.63□□□□□ -1.99
CLCNKAP51800 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.63□□□□□ -1.99
CLCNKAP51800 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.63□□□□□ -1.99
CLCNKAP51800 AC096725.1-201ENST00000514266 313 ntBASIC2.63□□□□□ -1.99
CLCNKAP51800 FRG2DP-202ENST00000566967 323 ntBASIC2.63□□□□□ -1.99
CLCNKAP51800 AC009163.5-201ENST00000575421 637 ntBASIC2.63□□□□□ -1.99
CLCNKAP51800 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.63□□□□□ -1.99
CLCNKAP51800 MIR3117-201ENST00000584034 78 ntBASIC2.63□□□□□ -1.99
CLCNKAP51800 MTND4LP32-201ENST00000636111 270 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms