Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RPL23AP6-201ENST00000446637 472 ntBASIC1.76□□□□□ -2.13
CASP4P49662 AC079448.1-201ENST00000449377 373 ntBASIC1.76□□□□□ -2.13
CASP4P49662 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.76□□□□□ -2.13
CASP4P49662 AL353752.1-201ENST00000454946 260 ntBASIC1.76□□□□□ -2.13
CASP4P49662 HMGN2P23-201ENST00000456759 269 ntBASIC1.76□□□□□ -2.13
CASP4P49662 PRELID3BP1-201ENST00000457142 540 ntBASIC1.76□□□□□ -2.13
CASP4P49662 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.76□□□□□ -2.13
CASP4P49662 PTP4A1P4-201ENST00000512479 322 ntBASIC1.76□□□□□ -2.13
CASP4P49662 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.76□□□□□ -2.13
CASP4P49662 RNU6-1178P-201ENST00000516674 107 ntBASIC1.76□□□□□ -2.13
CASP4P49662 AC109479.2-201ENST00000517842 174 ntBASIC1.76□□□□□ -2.13
CASP4P49662 AP001893.2-201ENST00000526949 202 ntBASIC1.76□□□□□ -2.13
CASP4P49662 MIR3122-201ENST00000577243 73 ntBASIC1.76□□□□□ -2.13
CASP4P49662 Z84480.1-201ENST00000605131 311 ntBASIC1.76□□□□□ -2.13
CASP4P49662 AC109347.2-201ENST00000610220 349 ntBASIC1.76□□□□□ -2.13
CASP4P49662 AC004908.3-201ENST00000610248 625 ntBASIC1.76□□□□□ -2.13
CASP4P49662 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.76□□□□□ -2.13
CASP4P49662 AL359314.1-201ENST00000616913 261 ntBASIC1.76□□□□□ -2.13
CASP4P49662 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
CASP4P49662 SNORD115-3-201ENST00000363100 82 ntBASIC1.75□□□□□ -2.13
CASP4P49662 RNU6-944P-201ENST00000364023 107 ntBASIC1.75□□□□□ -2.13
CASP4P49662 Y_RNA.324-201ENST00000365165 102 ntBASIC1.75□□□□□ -2.13
CASP4P49662 RNU6-1029P-201ENST00000384109 107 ntBASIC1.75□□□□□ -2.13
CASP4P49662 RNA5SP213-201ENST00000391031 106 ntBASIC1.75□□□□□ -2.13
CASP4P49662 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.75□□□□□ -2.13
CASP4P49662 SNORD56-201ENST00000413522 71 ntBASIC1.75□□□□□ -2.13
CASP4P49662 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.75□□□□□ -2.13
CASP4P49662 AL669831.1-202ENST00000428504 417 ntBASIC1.75□□□□□ -2.13
CASP4P49662 GTF2IP13-201ENST00000438487 386 ntBASIC1.75□□□□□ -2.13
CASP4P49662 MTND1P27-201ENST00000451117 902 ntBASIC1.75□□□□□ -2.13
CASP4P49662 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.75□□□□□ -2.13
CASP4P49662 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.75□□□□□ -2.13
CASP4P49662 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.75□□□□□ -2.13
CASP4P49662 RPS29P15-201ENST00000458329 171 ntBASIC1.75□□□□□ -2.13
CASP4P49662 LRRC34P2-201ENST00000514850 553 ntBASIC1.75□□□□□ -2.13
CASP4P49662 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.75□□□□□ -2.13
CASP4P49662 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.75□□□□□ -2.13
CASP4P49662 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.75□□□□□ -2.13
CASP4P49662 MIR3683-201ENST00000580847 82 ntBASIC1.75□□□□□ -2.13
CASP4P49662 AC078795.2-201ENST00000602835 1252 ntBASIC1.75□□□□□ -2.13
CASP4P49662 MIR502-201ENST00000606349 86 ntBASIC1.75□□□□□ -2.13
CASP4P49662 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
CASP4P49662 AL773524.1-201ENST00000614065 229 ntBASIC1.75□□□□□ -2.13
CASP4P49662 AC072046.2-201ENST00000618366 268 ntBASIC1.75□□□□□ -2.13
CASP4P49662 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CASP4P49662 AC006026.1-201ENST00000444025 1803 ntBASIC1.75□□□□□ -2.13
CASP4P49662 RNU6-282P-201ENST00000365357 103 ntBASIC1.74□□□□□ -2.13
CASP4P49662 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.74□□□□□ -2.13
CASP4P49662 RNU6-456P-201ENST00000384493 107 ntBASIC1.74□□□□□ -2.13
CASP4P49662 RNU6-606P-201ENST00000384721 111 ntBASIC1.74□□□□□ -2.13
CASP4P49662 BTF3L4P2-201ENST00000392798 346 ntBASIC1.74□□□□□ -2.13
CASP4P49662 BX295541.1-201ENST00000417774 250 ntBASIC1.74□□□□□ -2.13
CASP4P49662 AC244636.1-201ENST00000421152 228 ntBASIC1.74□□□□□ -2.13
CASP4P49662 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.74□□□□□ -2.13
CASP4P49662 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.74□□□□□ -2.13
CASP4P49662 MTND2P4-201ENST00000445034 1004 ntBASIC1.74□□□□□ -2.13
CASP4P49662 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.74□□□□□ -2.13
CASP4P49662 GMFBP1-201ENST00000467831 427 ntBASIC1.74□□□□□ -2.13
CASP4P49662 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.74□□□□□ -2.13
CASP4P49662 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.74□□□□□ -2.13
CASP4P49662 AP005639.2-201ENST00000527592 928 ntBASIC1.74□□□□□ -2.13
CASP4P49662 AP002963.1-201ENST00000530590 184 ntBASIC1.74□□□□□ -2.13
CASP4P49662 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.74□□□□□ -2.13
CASP4P49662 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.74□□□□□ -2.13
CASP4P49662 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.74□□□□□ -2.13
CASP4P49662 MIR4703-201ENST00000577728 79 ntBASIC1.74□□□□□ -2.13
CASP4P49662 AC068790.2-201ENST00000602601 557 ntBASIC1.74□□□□□ -2.13
CASP4P49662 MIR7843-201ENST00000622274 79 ntBASIC1.74□□□□□ -2.13
CASP4P49662 AC009161.2-201ENST00000624626 138 ntBASIC1.74□□□□□ -2.13
CASP4P49662 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CASP4P49662 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
CASP4P49662 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CASP4P49662 RNU6-105P-201ENST00000363909 104 ntBASIC1.73□□□□□ -2.13
CASP4P49662 MIR544A-201ENST00000384855 91 ntBASIC1.73□□□□□ -2.13
CASP4P49662 AL033519.2-201ENST00000403958 392 ntBASIC1.73□□□□□ -2.13
CASP4P49662 Y_RNA.597-201ENST00000410463 100 ntBASIC1.73□□□□□ -2.13
CASP4P49662 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.73□□□□□ -2.13
CASP4P49662 KATNBL1P3-201ENST00000443475 909 ntBASIC1.73□□□□□ -2.13
CASP4P49662 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.73□□□□□ -2.13
CASP4P49662 MTND1P18-201ENST00000448191 573 ntBASIC1.73□□□□□ -2.13
CASP4P49662 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.73□□□□□ -2.13
CASP4P49662 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.73□□□□□ -2.13
CASP4P49662 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.73□□□□□ -2.13
CASP4P49662 RNU6-377P-201ENST00000515965 102 ntBASIC1.73□□□□□ -2.13
CASP4P49662 RNU6-548P-201ENST00000517083 115 ntBASIC1.73□□□□□ -2.13
CASP4P49662 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CASP4P49662 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.73□□□□□ -2.13
CASP4P49662 HSBP1P1-201ENST00000555205 166 ntBASIC1.73□□□□□ -2.13
CASP4P49662 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.73□□□□□ -2.13
CASP4P49662 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
CASP4P49662 U1.36-201ENST00000620684 176 ntBASIC1.73□□□□□ -2.13
CASP4P49662 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CASP4P49662 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CASP4P49662 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
CASP4P49662 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CASP4P49662 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CASP4P49662 RNU1-17P-201ENST00000363022 152 ntBASIC1.72□□□□□ -2.13
CASP4P49662 RNU6-181P-201ENST00000363225 107 ntBASIC1.72□□□□□ -2.13
CASP4P49662 Y_RNA.480-201ENST00000384364 102 ntBASIC1.72□□□□□ -2.13
CASP4P49662 SNORA8-201ENST00000384574 139 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms