Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.38□□□□□ -2.03
LHX1P48742 RNA5SP181-201ENST00000410246 98 ntBASIC2.38□□□□□ -2.03
LHX1P48742 RNU2-23P-201ENST00000410545 195 ntBASIC2.38□□□□□ -2.03
LHX1P48742 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.38□□□□□ -2.03
LHX1P48742 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.38□□□□□ -2.03
LHX1P48742 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LHX1P48742 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.38□□□□□ -2.03
LHX1P48742 RNU7-26P-201ENST00000458980 63 ntBASIC2.38□□□□□ -2.03
LHX1P48742 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.38□□□□□ -2.03
LHX1P48742 AC011352.1-201ENST00000512300 793 ntBASIC2.38□□□□□ -2.03
LHX1P48742 RNU1-41P-201ENST00000516161 162 ntBASIC2.38□□□□□ -2.03
LHX1P48742 RNA5SP200-201ENST00000516360 103 ntBASIC2.38□□□□□ -2.03
LHX1P48742 RNU1-48P-201ENST00000516400 162 ntBASIC2.38□□□□□ -2.03
LHX1P48742 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.38□□□□□ -2.03
LHX1P48742 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.38□□□□□ -2.03
LHX1P48742 PSMA3P-201ENST00000555485 635 ntBASIC2.38□□□□□ -2.03
LHX1P48742 AC107304.1-201ENST00000604229 296 ntBASIC2.38□□□□□ -2.03
LHX1P48742 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
LHX1P48742 AC007792.1-201ENST00000623023 402 ntBASIC2.38□□□□□ -2.03
LHX1P48742 AC024614.3-201ENST00000637860 256 ntBASIC2.38□□□□□ -2.03
LHX1P48742 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.38□□□□□ -2.03
LHX1P48742 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LHX1P48742 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
LHX1P48742 ZNF271P-202ENST00000465539 1970 ntBASIC2.38□□□□□ -2.03
LHX1P48742 MAPK10-266ENST00000641066 6555 ntBASIC2.37□□□□□ -2.03
LHX1P48742 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
LHX1P48742 Y_RNA.167-201ENST00000363735 109 ntBASIC2.37□□□□□ -2.03
LHX1P48742 Y_RNA.256-201ENST00000364594 104 ntBASIC2.37□□□□□ -2.03
LHX1P48742 RNU6-534P-201ENST00000364877 106 ntBASIC2.37□□□□□ -2.03
LHX1P48742 Y_RNA.373-201ENST00000365600 103 ntBASIC2.37□□□□□ -2.03
LHX1P48742 MIR544A-201ENST00000384855 91 ntBASIC2.37□□□□□ -2.03
LHX1P48742 RNU6-1106P-201ENST00000390845 107 ntBASIC2.37□□□□□ -2.03
LHX1P48742 RNU6-293P-201ENST00000411259 106 ntBASIC2.37□□□□□ -2.03
LHX1P48742 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.37□□□□□ -2.03
LHX1P48742 EIF1P1-201ENST00000421436 341 ntBASIC2.37□□□□□ -2.03
LHX1P48742 SRIP2-201ENST00000428470 166 ntBASIC2.37□□□□□ -2.03
LHX1P48742 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.37□□□□□ -2.03
LHX1P48742 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LHX1P48742 AC092989.1-201ENST00000481235 277 ntBASIC2.37□□□□□ -2.03
LHX1P48742 AC083904.1-201ENST00000487828 231 ntBASIC2.37□□□□□ -2.03
LHX1P48742 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.37□□□□□ -2.03
LHX1P48742 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.37□□□□□ -2.03
LHX1P48742 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.37□□□□□ -2.03
LHX1P48742 AP000763.2-201ENST00000540641 163 ntBASIC2.37□□□□□ -2.03
LHX1P48742 AC103996.1-201ENST00000555468 102 ntBASIC2.37□□□□□ -2.03
LHX1P48742 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.37□□□□□ -2.03
LHX1P48742 AL133241.1-201ENST00000556832 487 ntBASIC2.37□□□□□ -2.03
LHX1P48742 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.37□□□□□ -2.03
LHX1P48742 MIR4298-201ENST00000584380 73 ntBASIC2.37□□□□□ -2.03
LHX1P48742 MIR5692C1-201ENST00000585309 91 ntBASIC2.37□□□□□ -2.03
LHX1P48742 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.37□□□□□ -2.03
LHX1P48742 RMST_3.1-201ENST00000611651 109 ntBASIC2.37□□□□□ -2.03
LHX1P48742 AC104237.2-201ENST00000612456 443 ntBASIC2.37□□□□□ -2.03
LHX1P48742 AC009831.4-201ENST00000620744 325 ntBASIC2.37□□□□□ -2.03
LHX1P48742 MIR6132-201ENST00000622083 109 ntBASIC2.37□□□□□ -2.03
LHX1P48742 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LHX1P48742 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.36□□□□□ -2.03
LHX1P48742 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.36□□□□□ -2.03
LHX1P48742 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.36□□□□□ -2.03
LHX1P48742 RNU6-529P-201ENST00000363383 104 ntBASIC2.36□□□□□ -2.03
LHX1P48742 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LHX1P48742 SNORD73A-201ENST00000386062 65 ntBASIC2.36□□□□□ -2.03
LHX1P48742 Y_RNA.615-201ENST00000410769 117 ntBASIC2.36□□□□□ -2.03
LHX1P48742 Y_RNA.619-201ENST00000410951 90 ntBASIC2.36□□□□□ -2.03
LHX1P48742 RNU6-373P-201ENST00000411247 98 ntBASIC2.36□□□□□ -2.03
LHX1P48742 OOSP1P1-201ENST00000423265 274 ntBASIC2.36□□□□□ -2.03
LHX1P48742 AC008267.5-201ENST00000424928 265 ntBASIC2.36□□□□□ -2.03
LHX1P48742 MRPS10P2-201ENST00000431226 381 ntBASIC2.36□□□□□ -2.03
LHX1P48742 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.36□□□□□ -2.03
LHX1P48742 AC096638.1-201ENST00000444678 216 ntBASIC2.36□□□□□ -2.03
LHX1P48742 RPL39P29-201ENST00000447779 157 ntBASIC2.36□□□□□ -2.03
LHX1P48742 HMGN2P26-201ENST00000463169 339 ntBASIC2.36□□□□□ -2.03
LHX1P48742 CKS1BP2-201ENST00000497342 240 ntBASIC2.36□□□□□ -2.03
LHX1P48742 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.36□□□□□ -2.03
LHX1P48742 Y_RNA.665-201ENST00000516177 98 ntBASIC2.36□□□□□ -2.03
LHX1P48742 RNU2-53P-201ENST00000516257 147 ntBASIC2.36□□□□□ -2.03
LHX1P48742 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.36□□□□□ -2.03
LHX1P48742 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.36□□□□□ -2.03
LHX1P48742 AC025423.5-201ENST00000550230 219 ntBASIC2.36□□□□□ -2.03
LHX1P48742 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.36□□□□□ -2.03
LHX1P48742 MIR5194-201ENST00000582634 120 ntBASIC2.36□□□□□ -2.03
LHX1P48742 BNIP3P16-201ENST00000589779 534 ntBASIC2.36□□□□□ -2.03
LHX1P48742 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.36□□□□□ -2.03
LHX1P48742 BNIP3P25-201ENST00000596023 559 ntBASIC2.36□□□□□ -2.03
LHX1P48742 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.36□□□□□ -2.03
LHX1P48742 MIR5739-201ENST00000619803 80 ntBASIC2.36□□□□□ -2.03
LHX1P48742 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.36□□□□□ -2.03
LHX1P48742 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.36□□□□□ -2.03
LHX1P48742 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
LHX1P48742 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.35□□□□□ -2.03
LHX1P48742 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LHX1P48742 RNU1-72P-201ENST00000362976 153 ntBASIC2.35□□□□□ -2.03
LHX1P48742 RNA5SP125-201ENST00000364843 120 ntBASIC2.35□□□□□ -2.03
LHX1P48742 RNU6-1072P-201ENST00000384703 107 ntBASIC2.35□□□□□ -2.03
LHX1P48742 RNU6-443P-201ENST00000384780 107 ntBASIC2.35□□□□□ -2.03
LHX1P48742 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LHX1P48742 SNORA48.3-201ENST00000391081 134 ntBASIC2.35□□□□□ -2.03
LHX1P48742 RNU6-332P-201ENST00000391193 108 ntBASIC2.35□□□□□ -2.03
LHX1P48742 RPS29P13-201ENST00000402041 169 ntBASIC2.35□□□□□ -2.03
LHX1P48742 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms