Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 RPL21P99-201ENST00000480369 423 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 AC027575.1-201ENST00000481064 460 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RN7SL489P-201ENST00000486185 223 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.57□□□□□ -2.16
CSNK1A1P48729 RN7SL327P-201ENST00000488659 223 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RPS29P11-201ENST00000496507 171 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 MTCO3P7-201ENST00000510008 774 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RN7SKP256-201ENST00000517201 314 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 AP005435.4-201ENST00000529514 284 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 SUB1P2-201ENST00000556401 297 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.57□□□□□ -2.16
CSNK1A1P48729 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.57□□□□□ -2.16
CSNK1A1P48729 AC024614.2-201ENST00000577584 372 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.57□□□□□ -2.16
CSNK1A1P48729 AC119751.7-201ENST00000600494 245 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RNU6-6P-201ENST00000606623 107 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 AC109347.2-201ENST00000610220 349 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 AL359314.1-201ENST00000616913 261 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 RN7SL853P-201ENST00000617250 223 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 AC097372.5-201ENST00000623665 376 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 MIR3974-201ENST00000637126 96 ntBASIC1.57□□□□□ -2.16
CSNK1A1P48729 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CSNK1A1P48729 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.56□□□□□ -2.16
CSNK1A1P48729 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.56□□□□□ -2.16
CSNK1A1P48729 RNU6-212P-201ENST00000362642 104 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 RNU6-944P-201ENST00000364023 107 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 RNU6-393P-201ENST00000384475 107 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 RNU6-1127P-201ENST00000384580 107 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 SNORA16.2-201ENST00000390991 127 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 SNORD70.1-201ENST00000391007 85 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 MIR1294-201ENST00000408503 142 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 RN7SKP284-201ENST00000411002 343 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.56□□□□□ -2.16
CSNK1A1P48729 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.56□□□□□ -2.16
CSNK1A1P48729 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.56□□□□□ -2.16
CSNK1A1P48729 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 AC090960.1-201ENST00000421072 306 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.56□□□□□ -2.16
CSNK1A1P48729 RPL39P29-201ENST00000447779 157 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 AC022364.2-201ENST00000457963 554 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 AC104564.1-201ENST00000493028 407 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 RPL23AP63-201ENST00000498752 471 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.56□□□□□ -2.16
CSNK1A1P48729 RNU2-69P-201ENST00000516061 100 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.56□□□□□ -2.16
CSNK1A1P48729 CYCSP27-201ENST00000527643 293 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.56□□□□□ -2.16
CSNK1A1P48729 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.56□□□□□ -2.16
CSNK1A1P48729 HSBP1P1-201ENST00000555205 166 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.56□□□□□ -2.16
CSNK1A1P48729 AL391840.1-201ENST00000571144 367 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.56□□□□□ -2.16
CSNK1A1P48729 AC078795.2-201ENST00000602835 1252 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 Z82243.1-201ENST00000609432 473 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
CSNK1A1P48729 uc_338.11-201ENST00000619132 160 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 U1.36-201ENST00000620684 176 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 AC022079.1-201ENST00000621546 602 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 AC084768.2-201ENST00000622736 221 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 AC007792.1-201ENST00000623023 402 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 AC090517.3-201ENST00000625170 141 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CSNK1A1P48729 ZNF680P1-201ENST00000436625 1469 ntBASIC1.56□□□□□ -2.16
CSNK1A1P48729 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
CSNK1A1P48729 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.55□□□□□ -2.16
CSNK1A1P48729 SNORD115-3-201ENST00000363100 82 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 RNU6-527P-201ENST00000363425 104 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CSNK1A1P48729 MIR1283-2-201ENST00000408621 87 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 MTATP6P18-201ENST00000417994 673 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 UBE2V1P4-201ENST00000425374 344 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 AL645568.3-201ENST00000433683 316 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 RPL7P54-201ENST00000438336 674 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 AL122001.1-201ENST00000457027 370 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 RPL30P1-201ENST00000488676 339 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 AC010486.3-201ENST00000511602 785 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 LRRC34P2-201ENST00000514850 553 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 RN7SKP219-201ENST00000516825 296 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.55□□□□□ -2.16
CSNK1A1P48729 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.55□□□□□ -2.16
CSNK1A1P48729 AP003392.2-201ENST00000527269 208 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.55□□□□□ -2.16
CSNK1A1P48729 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.55□□□□□ -2.16
CSNK1A1P48729 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.55□□□□□ -2.16
CSNK1A1P48729 MIR3198-2-201ENST00000577868 80 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 AC008752.3-201ENST00000588113 712 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 AL136363.2-201ENST00000604173 851 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 AC123912.5-201ENST00000605470 343 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
CSNK1A1P48729 AC022418.1-201ENST00000624118 445 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 AC002543.1-201ENST00000299783 1954 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 ELL2P3-201ENST00000457883 1602 ntBASIC1.55□□□□□ -2.16
CSNK1A1P48729 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
CSNK1A1P48729 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.54□□□□□ -2.16
CSNK1A1P48729 snoU2_19.1-201ENST00000362361 80 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 RNU6-1120P-201ENST00000362988 108 ntBASIC1.54□□□□□ -2.16
CSNK1A1P48729 RNU6-105P-201ENST00000363909 104 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms