Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RNU6-692P-201ENST00000384496 107 ntBASIC1.69□□□□□ -2.14
SSR1P43307 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.69□□□□□ -2.14
SSR1P43307 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.69□□□□□ -2.14
SSR1P43307 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.69□□□□□ -2.14
SSR1P43307 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.69□□□□□ -2.14
SSR1P43307 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.69□□□□□ -2.14
SSR1P43307 Z99497.1-201ENST00000421282 135 ntBASIC1.69□□□□□ -2.14
SSR1P43307 AL591043.1-201ENST00000432461 424 ntBASIC1.69□□□□□ -2.14
SSR1P43307 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.69□□□□□ -2.14
SSR1P43307 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SSR1P43307 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.69□□□□□ -2.14
SSR1P43307 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.69□□□□□ -2.14
SSR1P43307 AC074344.1-201ENST00000512823 224 ntBASIC1.69□□□□□ -2.14
SSR1P43307 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.69□□□□□ -2.14
SSR1P43307 AC012414.6-201ENST00000568241 401 ntBASIC1.69□□□□□ -2.14
SSR1P43307 AC137800.2-201ENST00000574375 120 ntBASIC1.69□□□□□ -2.14
SSR1P43307 AC091135.1-201ENST00000585943 307 ntBASIC1.69□□□□□ -2.14
SSR1P43307 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
SSR1P43307 AC245060.5-201ENST00000610778 3293 ntBASIC1.68□□□□□ -2.14
SSR1P43307 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SSR1P43307 RNU4-21P-201ENST00000362802 126 ntBASIC1.68□□□□□ -2.14
SSR1P43307 SNORD114-6-201ENST00000364393 72 ntBASIC1.68□□□□□ -2.14
SSR1P43307 Y_RNA.324-201ENST00000365165 102 ntBASIC1.68□□□□□ -2.14
SSR1P43307 MT-TH-201ENST00000387441 69 ntBASIC1.68□□□□□ -2.14
SSR1P43307 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.68□□□□□ -2.14
SSR1P43307 RPL30P13-201ENST00000418873 348 ntBASIC1.68□□□□□ -2.14
SSR1P43307 MTND2P9-201ENST00000422293 931 ntBASIC1.68□□□□□ -2.14
SSR1P43307 OOSP1P1-201ENST00000423265 274 ntBASIC1.68□□□□□ -2.14
SSR1P43307 AC243964.1-201ENST00000441814 261 ntBASIC1.68□□□□□ -2.14
SSR1P43307 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.68□□□□□ -2.14
SSR1P43307 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.68□□□□□ -2.14
SSR1P43307 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.68□□□□□ -2.14
SSR1P43307 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.68□□□□□ -2.14
SSR1P43307 AC107304.1-201ENST00000604229 296 ntBASIC1.68□□□□□ -2.14
SSR1P43307 AL360219.1-201ENST00000610230 366 ntBASIC1.68□□□□□ -2.14
SSR1P43307 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.68□□□□□ -2.14
SSR1P43307 AL590240.4-201ENST00000616908 390 ntBASIC1.68□□□□□ -2.14
SSR1P43307 AC108479.2-201ENST00000617314 601 ntBASIC1.68□□□□□ -2.14
SSR1P43307 AC099842.1-201ENST00000619919 596 ntBASIC1.68□□□□□ -2.14
SSR1P43307 Z69720.2-201ENST00000624755 279 ntBASIC1.68□□□□□ -2.14
SSR1P43307 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.68□□□□□ -2.14
SSR1P43307 AC002543.1-201ENST00000299783 1954 ntBASIC1.68□□□□□ -2.14
SSR1P43307 RNU4-15P-201ENST00000362613 141 ntBASIC1.67□□□□□ -2.14
SSR1P43307 RNU6-1029P-201ENST00000384109 107 ntBASIC1.67□□□□□ -2.14
SSR1P43307 MIR150-201ENST00000385048 84 ntBASIC1.67□□□□□ -2.14
SSR1P43307 RNU2-8P-201ENST00000410727 190 ntBASIC1.67□□□□□ -2.14
SSR1P43307 RNU6-293P-201ENST00000411259 106 ntBASIC1.67□□□□□ -2.14
SSR1P43307 MTND2P18-201ENST00000419962 1030 ntBASIC1.67□□□□□ -2.14
SSR1P43307 USP9YP18-201ENST00000425912 695 ntBASIC1.67□□□□□ -2.14
SSR1P43307 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.67□□□□□ -2.14
SSR1P43307 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.67□□□□□ -2.14
SSR1P43307 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.67□□□□□ -2.14
SSR1P43307 MTND2P33-201ENST00000506452 1031 ntBASIC1.67□□□□□ -2.14
SSR1P43307 AC117532.1-201ENST00000514638 323 ntBASIC1.67□□□□□ -2.14
SSR1P43307 SNORA18.6-201ENST00000516792 115 ntBASIC1.67□□□□□ -2.14
SSR1P43307 RN7SKP256-201ENST00000517201 314 ntBASIC1.67□□□□□ -2.14
SSR1P43307 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.67□□□□□ -2.14
SSR1P43307 MIR3913-1-201ENST00000577744 102 ntBASIC1.67□□□□□ -2.14
SSR1P43307 MIR4775-201ENST00000581168 75 ntBASIC1.67□□□□□ -2.14
SSR1P43307 AC110760.3-201ENST00000598794 467 ntBASIC1.67□□□□□ -2.14
SSR1P43307 AC120349.3-201ENST00000624377 529 ntBASIC1.67□□□□□ -2.14
SSR1P43307 U4.7-201ENST00000638126 106 ntBASIC1.67□□□□□ -2.14
SSR1P43307 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.66□□□□□ -2.14
SSR1P43307 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.66□□□□□ -2.14
SSR1P43307 RNU1-58P-201ENST00000362413 163 ntBASIC1.66□□□□□ -2.14
SSR1P43307 RNU6-105P-201ENST00000363909 104 ntBASIC1.66□□□□□ -2.14
SSR1P43307 MIR29B2-201ENST00000385055 81 ntBASIC1.66□□□□□ -2.14
SSR1P43307 SNORA26.8-201ENST00000391306 124 ntBASIC1.66□□□□□ -2.14
SSR1P43307 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.66□□□□□ -2.14
SSR1P43307 AC009310.1-201ENST00000414414 451 ntBASIC1.66□□□□□ -2.14
SSR1P43307 MTCO2P34-201ENST00000421994 607 ntBASIC1.66□□□□□ -2.14
SSR1P43307 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.66□□□□□ -2.14
SSR1P43307 GPR143P-201ENST00000434155 205 ntBASIC1.66□□□□□ -2.14
SSR1P43307 AL445567.1-201ENST00000439121 144 ntBASIC1.66□□□□□ -2.14
SSR1P43307 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.66□□□□□ -2.14
SSR1P43307 SNRPGP9-201ENST00000456025 225 ntBASIC1.66□□□□□ -2.14
SSR1P43307 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.66□□□□□ -2.14
SSR1P43307 SNORA31.16-201ENST00000516773 139 ntBASIC1.66□□□□□ -2.14
SSR1P43307 RNU6-410P-201ENST00000517006 107 ntBASIC1.66□□□□□ -2.14
SSR1P43307 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.66□□□□□ -2.14
SSR1P43307 AP000873.5-201ENST00000533906 236 ntBASIC1.66□□□□□ -2.14
SSR1P43307 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.66□□□□□ -2.14
SSR1P43307 SUB1P3-201ENST00000564581 315 ntBASIC1.66□□□□□ -2.14
SSR1P43307 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.66□□□□□ -2.14
SSR1P43307 AL136363.2-201ENST00000604173 851 ntBASIC1.66□□□□□ -2.14
SSR1P43307 AC064872.1-201ENST00000604823 1072 ntBASIC1.66□□□□□ -2.14
SSR1P43307 AL022345.1-201ENST00000607292 135 ntBASIC1.66□□□□□ -2.14
SSR1P43307 AC138649.3-201ENST00000622154 254 ntBASIC1.66□□□□□ -2.14
SSR1P43307 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.66□□□□□ -2.14
SSR1P43307 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SSR1P43307 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.66□□□□□ -2.14
SSR1P43307 Y_RNA.169-201ENST00000363745 96 ntBASIC1.65□□□□□ -2.15
SSR1P43307 RNU6-336P-201ENST00000364891 107 ntBASIC1.65□□□□□ -2.15
SSR1P43307 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SSR1P43307 MIR1289-2-201ENST00000408360 111 ntBASIC1.65□□□□□ -2.15
SSR1P43307 RNU2-9P-201ENST00000410194 145 ntBASIC1.65□□□□□ -2.15
SSR1P43307 MTND3P17-201ENST00000416968 344 ntBASIC1.65□□□□□ -2.15
SSR1P43307 HMGB1P18-201ENST00000438801 619 ntBASIC1.65□□□□□ -2.15
SSR1P43307 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.65□□□□□ -2.15
SSR1P43307 AC006026.2-201ENST00000457376 180 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms