Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RPL36AP48-201ENST00000485521 314 ntBASIC-0.23□□□□□ -2.45
HTTP42858 RPL30P1-201ENST00000488676 339 ntBASIC-0.23□□□□□ -2.45
HTTP42858 AC111000.5-201ENST00000506559 1178 ntBASIC-0.23□□□□□ -2.45
HTTP42858 MTCO3P7-201ENST00000510008 774 ntBASIC-0.23□□□□□ -2.45
HTTP42858 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.23□□□□□ -2.45
HTTP42858 AC005951.2-201ENST00000576282 495 ntBASIC-0.23□□□□□ -2.45
HTTP42858 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
HTTP42858 RNU2-48P-201ENST00000410694 191 ntBASIC-0.23□□□□□ -2.45
HTTP42858 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.23□□□□□ -2.45
HTTP42858 MTND1P20-201ENST00000430341 950 ntBASIC-0.23□□□□□ -2.45
HTTP42858 RPL36P19-201ENST00000430744 301 ntBASIC-0.23□□□□□ -2.45
HTTP42858 RAC1P7-201ENST00000445367 377 ntBASIC-0.23□□□□□ -2.45
HTTP42858 ZNF736P6Y-201ENST00000447526 1213 ntBASIC-0.23□□□□□ -2.45
HTTP42858 RPS26P48-201ENST00000491713 339 ntBASIC-0.23□□□□□ -2.45
HTTP42858 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC-0.23□□□□□ -2.45
HTTP42858 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.23□□□□□ -2.45
HTTP42858 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC-0.23□□□□□ -2.45
HTTP42858 AL357312.1-201ENST00000603879 298 ntBASIC-0.23□□□□□ -2.45
HTTP42858 AC007363.1-201ENST00000604736 620 ntBASIC-0.23□□□□□ -2.45
HTTP42858 AP000860.1-201ENST00000605250 559 ntBASIC-0.23□□□□□ -2.45
HTTP42858 AP005229.2-201ENST00000609980 697 ntBASIC-0.23□□□□□ -2.45
HTTP42858 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.24□□□□□ -2.45
HTTP42858 RNU6-160P-201ENST00000384591 107 ntBASIC-0.24□□□□□ -2.45
HTTP42858 RNA5SP222-201ENST00000411039 105 ntBASIC-0.24□□□□□ -2.45
HTTP42858 RPL23AP50-201ENST00000434149 455 ntBASIC-0.24□□□□□ -2.45
HTTP42858 NANOGP2-201ENST00000435391 727 ntBASIC-0.24□□□□□ -2.45
HTTP42858 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.24□□□□□ -2.45
HTTP42858 RNA5SP269-201ENST00000459032 137 ntBASIC-0.24□□□□□ -2.45
HTTP42858 AC079140.3-201ENST00000511111 550 ntBASIC-0.24□□□□□ -2.45
HTTP42858 RNU6-1282P-201ENST00000516735 96 ntBASIC-0.24□□□□□ -2.45
HTTP42858 AC136618.2-201ENST00000575091 400 ntBASIC-0.24□□□□□ -2.45
HTTP42858 SNORA77B-201ENST00000578179 125 ntBASIC-0.24□□□□□ -2.45
HTTP42858 AC097065.2-201ENST00000608159 533 ntBASIC-0.24□□□□□ -2.45
HTTP42858 AC010809.3-201ENST00000621310 641 ntBASIC-0.24□□□□□ -2.45
HTTP42858 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.24□□□□□ -2.45
HTTP42858 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.24□□□□□ -2.45
HTTP42858 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.24□□□□□ -2.45
HTTP42858 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.24□□□□□ -2.45
HTTP42858 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC-0.24□□□□□ -2.45
HTTP42858 MEMO1P3-201ENST00000459811 302 ntBASIC-0.24□□□□□ -2.45
HTTP42858 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC-0.24□□□□□ -2.45
HTTP42858 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC-0.24□□□□□ -2.45
HTTP42858 AL512310.8-201ENST00000550183 120 ntBASIC-0.24□□□□□ -2.45
HTTP42858 AC011939.3-201ENST00000613686 466 ntBASIC-0.24□□□□□ -2.45
HTTP42858 AC084824.4-201ENST00000620106 731 ntBASIC-0.24□□□□□ -2.45
HTTP42858 AL031667.3-201ENST00000620124 655 ntBASIC-0.24□□□□□ -2.45
HTTP42858 AC107982.1-201ENST00000507171 1300 ntBASIC-0.24□□□□□ -2.45
HTTP42858 SNORA1.1-201ENST00000364671 133 ntBASIC-0.24□□□□□ -2.45
HTTP42858 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC-0.24□□□□□ -2.45
HTTP42858 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC-0.24□□□□□ -2.45
HTTP42858 AC010587.2-201ENST00000511727 448 ntBASIC-0.24□□□□□ -2.45
HTTP42858 AC104136.1-201ENST00000512969 394 ntBASIC-0.24□□□□□ -2.45
HTTP42858 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-0.24□□□□□ -2.45
HTTP42858 SNORD79.1-201ENST00000516069 84 ntBASIC-0.24□□□□□ -2.45
HTTP42858 AP003392.2-201ENST00000527269 208 ntBASIC-0.24□□□□□ -2.45
HTTP42858 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC-0.24□□□□□ -2.45
HTTP42858 AC093249.1-201ENST00000567049 203 ntBASIC-0.24□□□□□ -2.45
HTTP42858 AC138869.1-201ENST00000568623 124 ntBASIC-0.24□□□□□ -2.45
HTTP42858 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-0.24□□□□□ -2.45
HTTP42858 RNU6-23P-201ENST00000363283 107 ntBASIC-0.25□□□□□ -2.45
HTTP42858 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC-0.25□□□□□ -2.45
HTTP42858 RNU6-339P-201ENST00000384310 107 ntBASIC-0.25□□□□□ -2.45
HTTP42858 MIR610-201ENST00000385139 96 ntBASIC-0.25□□□□□ -2.45
HTTP42858 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.25□□□□□ -2.45
HTTP42858 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-0.25□□□□□ -2.45
HTTP42858 AL096829.2-201ENST00000446582 742 ntBASIC-0.25□□□□□ -2.45
HTTP42858 AC104982.1-201ENST00000478775 574 ntBASIC-0.25□□□□□ -2.45
HTTP42858 SNORA25.11-201ENST00000515935 105 ntBASIC-0.25□□□□□ -2.45
HTTP42858 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.25□□□□□ -2.45
HTTP42858 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.25□□□□□ -2.45
HTTP42858 AC109329.1-201ENST00000518744 317 ntBASIC-0.25□□□□□ -2.45
HTTP42858 AC002400.1-201ENST00000569310 726 ntBASIC-0.25□□□□□ -2.45
HTTP42858 MIR1295B-201ENST00000636144 60 ntBASIC-0.25□□□□□ -2.45
HTTP42858 RNA5SP259-201ENST00000365541 109 ntBASIC-0.25□□□□□ -2.45
HTTP42858 SNORD116-13-201ENST00000384408 92 ntBASIC-0.25□□□□□ -2.45
HTTP42858 RNU6-750P-201ENST00000390946 107 ntBASIC-0.25□□□□□ -2.45
HTTP42858 RNU6-821P-201ENST00000390995 107 ntBASIC-0.25□□□□□ -2.45
HTTP42858 AL139098.1-201ENST00000407291 389 ntBASIC-0.25□□□□□ -2.45
HTTP42858 AC093422.3-201ENST00000428506 305 ntBASIC-0.25□□□□□ -2.45
HTTP42858 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.25□□□□□ -2.45
HTTP42858 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC-0.25□□□□□ -2.45
HTTP42858 MTND1P3-201ENST00000484956 952 ntBASIC-0.25□□□□□ -2.45
HTTP42858 AC097473.1-201ENST00000508142 408 ntBASIC-0.25□□□□□ -2.45
HTTP42858 SNORA25.12-201ENST00000516202 82 ntBASIC-0.25□□□□□ -2.45
HTTP42858 SNORD19.2-201ENST00000516978 73 ntBASIC-0.25□□□□□ -2.45
HTTP42858 AC069113.3-201ENST00000521019 150 ntBASIC-0.25□□□□□ -2.45
HTTP42858 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.25□□□□□ -2.45
HTTP42858 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC-0.25□□□□□ -2.45
HTTP42858 AL391813.1-201ENST00000603098 260 ntBASIC-0.25□□□□□ -2.45
HTTP42858 AL513534.2-201ENST00000603836 250 ntBASIC-0.25□□□□□ -2.45
HTTP42858 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.25□□□□□ -2.45
HTTP42858 AC091304.9-201ENST00000612091 226 ntBASIC-0.25□□□□□ -2.45
HTTP42858 RMST_5.1-201ENST00000618704 126 ntBASIC-0.25□□□□□ -2.45
HTTP42858 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
HTTP42858 MIR644A-201ENST00000385262 94 ntBASIC-0.26□□□□□ -2.45
HTTP42858 NDUFS5P4-201ENST00000412983 318 ntBASIC-0.26□□□□□ -2.45
HTTP42858 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.26□□□□□ -2.45
HTTP42858 AC114811.1-201ENST00000507207 168 ntBASIC-0.26□□□□□ -2.45
HTTP42858 SNORA31.2-201ENST00000516019 134 ntBASIC-0.26□□□□□ -2.45
HTTP42858 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms