Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC064836.2-201ENST00000609491 462 ntBASIC3.22□□□□□ -1.89
COL15A1P39059 MTND4LP32-201ENST00000636111 270 ntBASIC3.22□□□□□ -1.89
COL15A1P39059 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.21□□□□□ -1.9
COL15A1P39059 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.21□□□□□ -1.9
COL15A1P39059 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL15A1P39059 RNU6-593P-201ENST00000364716 112 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 RNU6-198P-201ENST00000384258 104 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 RNU6-933P-201ENST00000384424 107 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 RNU6-1304P-201ENST00000411374 106 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.21□□□□□ -1.9
COL15A1P39059 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.21□□□□□ -1.9
COL15A1P39059 RPS15AP10-201ENST00000432472 382 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 IFNA11P-201ENST00000446352 526 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 AC006026.2-201ENST00000457376 180 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 AC234781.5-201ENST00000508429 271 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 AC116337.1-201ENST00000509680 687 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 RNU6-377P-201ENST00000515965 102 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 RNU6-1016P-201ENST00000516689 94 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 AC109479.2-201ENST00000517842 174 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
COL15A1P39059 MIR5690-201ENST00000583739 73 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COL15A1P39059 HMGN2P15-201ENST00000585707 270 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 AL158827.2-201ENST00000602494 330 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 AL121917.1-203ENST00000605534 577 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 AL050343.2-201ENST00000607338 280 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 AC084781.2-201ENST00000615568 161 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 AC244517.12-201ENST00000623581 663 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.21□□□□□ -1.9
COL15A1P39059 AL691447.3-201ENST00000635020 330 ntBASIC3.21□□□□□ -1.9
COL15A1P39059 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
COL15A1P39059 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL15A1P39059 RNU6-827P-201ENST00000365553 106 ntBASIC3.2□□□□□ -1.9
COL15A1P39059 Z98749.2-208ENST00000381646 500 ntBASIC3.2□□□□□ -1.9
COL15A1P39059 SNORD21-201ENST00000383953 95 ntBASIC3.2□□□□□ -1.9
COL15A1P39059 Y_RNA.419-201ENST00000384041 102 ntBASIC3.2□□□□□ -1.9
COL15A1P39059 RNU6-790P-201ENST00000384479 105 ntBASIC3.2□□□□□ -1.9
COL15A1P39059 RNU6-306P-201ENST00000384617 107 ntBASIC3.2□□□□□ -1.9
COL15A1P39059 RNU6-482P-201ENST00000391068 107 ntBASIC3.2□□□□□ -1.9
COL15A1P39059 RNA5SP425-201ENST00000410336 112 ntBASIC3.2□□□□□ -1.9
COL15A1P39059 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.2□□□□□ -1.9
COL15A1P39059 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.2□□□□□ -1.9
COL15A1P39059 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.2□□□□□ -1.9
COL15A1P39059 RNU6-1037P-201ENST00000459571 107 ntBASIC3.2□□□□□ -1.9
COL15A1P39059 SNORD19B-201ENST00000459623 84 ntBASIC3.2□□□□□ -1.9
COL15A1P39059 AC091179.1-201ENST00000461606 579 ntBASIC3.2□□□□□ -1.9
COL15A1P39059 AP004607.1-201ENST00000524456 203 ntBASIC3.2□□□□□ -1.9
COL15A1P39059 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.2□□□□□ -1.9
COL15A1P39059 AC020895.1-201ENST00000595362 272 ntBASIC3.2□□□□□ -1.9
COL15A1P39059 PISRT1.1-201ENST00000616930 107 ntBASIC3.2□□□□□ -1.9
COL15A1P39059 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.2□□□□□ -1.9
COL15A1P39059 MIR6733-201ENST00000635723 61 ntBASIC3.2□□□□□ -1.9
COL15A1P39059 MIR3199-2-201ENST00000636243 86 ntBASIC3.2□□□□□ -1.9
COL15A1P39059 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.2□□□□□ -1.9
COL15A1P39059 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL15A1P39059 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
COL15A1P39059 Y_RNA.151-201ENST00000363566 112 ntBASIC3.19□□□□□ -1.9
COL15A1P39059 SNORD114-30-201ENST00000364448 72 ntBASIC3.19□□□□□ -1.9
COL15A1P39059 RNU6-1280P-201ENST00000365211 107 ntBASIC3.19□□□□□ -1.9
COL15A1P39059 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.19□□□□□ -1.9
COL15A1P39059 RNA5SP354-201ENST00000391247 136 ntBASIC3.19□□□□□ -1.9
COL15A1P39059 MTCYBP4-201ENST00000401524 249 ntBASIC3.19□□□□□ -1.9
COL15A1P39059 AL359511.1-201ENST00000402970 211 ntBASIC3.19□□□□□ -1.9
COL15A1P39059 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
COL15A1P39059 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.19□□□□□ -1.9
COL15A1P39059 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.19□□□□□ -1.9
COL15A1P39059 AC098831.1-201ENST00000440661 216 ntBASIC3.19□□□□□ -1.9
COL15A1P39059 PCMTD1P1-201ENST00000455560 355 ntBASIC3.19□□□□□ -1.9
COL15A1P39059 RNU7-187P-201ENST00000458985 68 ntBASIC3.19□□□□□ -1.9
COL15A1P39059 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.19□□□□□ -1.9
COL15A1P39059 RN7SL636P-201ENST00000497504 294 ntBASIC3.19□□□□□ -1.9
COL15A1P39059 AK3P2-201ENST00000507976 429 ntBASIC3.19□□□□□ -1.9
COL15A1P39059 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.19□□□□□ -1.9
COL15A1P39059 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.19□□□□□ -1.9
COL15A1P39059 AC010186.2-204ENST00000537668 439 ntBASIC3.19□□□□□ -1.9
COL15A1P39059 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.19□□□□□ -1.9
COL15A1P39059 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.19□□□□□ -1.9
COL15A1P39059 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.19□□□□□ -1.9
COL15A1P39059 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.19□□□□□ -1.9
COL15A1P39059 AL161423.1-201ENST00000613700 262 ntBASIC3.19□□□□□ -1.9
COL15A1P39059 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.19□□□□□ -1.9
COL15A1P39059 AL160413.1-201ENST00000622780 310 ntBASIC3.19□□□□□ -1.9
COL15A1P39059 AC110491.1-201ENST00000562191 2010 ntBASIC3.19□□□□□ -1.9
COL15A1P39059 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.19□□□□□ -1.9
COL15A1P39059 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.18□□□□□ -1.9
COL15A1P39059 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL15A1P39059 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.18□□□□□ -1.9
COL15A1P39059 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL15A1P39059 Y_RNA.226-201ENST00000364337 114 ntBASIC3.18□□□□□ -1.9
COL15A1P39059 RNU4-76P-201ENST00000364509 141 ntBASIC3.18□□□□□ -1.9
COL15A1P39059 RNU6-1011P-201ENST00000384668 107 ntBASIC3.18□□□□□ -1.9
COL15A1P39059 MIR517A-201ENST00000385001 87 ntBASIC3.18□□□□□ -1.9
COL15A1P39059 MIR764-201ENST00000390811 85 ntBASIC3.18□□□□□ -1.9
COL15A1P39059 AL135786.1-201ENST00000415892 214 ntBASIC3.18□□□□□ -1.9
COL15A1P39059 BPY2DP-201ENST00000422208 265 ntBASIC3.18□□□□□ -1.9
COL15A1P39059 BX276092.3-201ENST00000424182 230 ntBASIC3.18□□□□□ -1.9
COL15A1P39059 RPS29P12-201ENST00000460178 152 ntBASIC3.18□□□□□ -1.9
COL15A1P39059 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.18□□□□□ -1.9
COL15A1P39059 Y_RNA.718-201ENST00000517110 102 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms