Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.06□□□□□ -2.42
SNCAP37840 AC009902.1-201ENST00000519351 183 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 BNIP3P6-201ENST00000549284 499 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 MIR4667-201ENST00000578933 66 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 MIR4514-201ENST00000581410 57 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 MIR4637-201ENST00000582405 84 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 BNIP3P30-201ENST00000601184 574 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 AL358072.1-201ENST00000604156 575 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 Z98751.3-201ENST00000604447 521 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 MIR3976-201ENST00000606807 139 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 AL360219.1-201ENST00000610230 366 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 AC022709.1-201ENST00000615967 87 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 AC007742.2-201ENST00000618226 398 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 AC106730.3-201ENST00000624568 641 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.06□□□□□ -2.42
SNCAP37840 RNU4-67P-201ENST00000364569 141 ntBASIC-0.07□□□□□ -2.42
SNCAP37840 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.07□□□□□ -2.42
SNCAP37840 SNORD99-201ENST00000408612 74 ntBASIC-0.07□□□□□ -2.42
SNCAP37840 AC123900.1-201ENST00000420390 96 ntBASIC-0.07□□□□□ -2.42
SNCAP37840 AC011233.1-201ENST00000422812 283 ntBASIC-0.07□□□□□ -2.42
SNCAP37840 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.07□□□□□ -2.42
SNCAP37840 MTCO3P29-201ENST00000432119 779 ntBASIC-0.07□□□□□ -2.42
SNCAP37840 COX7BP2-201ENST00000437976 242 ntBASIC-0.07□□□□□ -2.42
SNCAP37840 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.07□□□□□ -2.42
SNCAP37840 RPL39P6-201ENST00000448289 150 ntBASIC-0.07□□□□□ -2.42
SNCAP37840 AL031313.1-201ENST00000448435 256 ntBASIC-0.07□□□□□ -2.42
SNCAP37840 AL162395.1-201ENST00000457882 422 ntBASIC-0.07□□□□□ -2.42
SNCAP37840 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.07□□□□□ -2.42
SNCAP37840 AC009646.1-201ENST00000510455 318 ntBASIC-0.07□□□□□ -2.42
SNCAP37840 SNORA62.5-201ENST00000516634 120 ntBASIC-0.07□□□□□ -2.42
SNCAP37840 RNU6-714P-201ENST00000516963 103 ntBASIC-0.07□□□□□ -2.42
SNCAP37840 AL391001.1-201ENST00000602747 715 ntBASIC-0.07□□□□□ -2.42
SNCAP37840 RMST_2.1-201ENST00000617263 136 ntBASIC-0.07□□□□□ -2.42
SNCAP37840 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.07□□□□□ -2.42
SNCAP37840 AC010487.4-201ENST00000637027 61 ntBASIC-0.07□□□□□ -2.42
SNCAP37840 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
SNCAP37840 SUGT1P1-201ENST00000379514 476 ntBASIC-0.08□□□□□ -2.42
SNCAP37840 MIR217-201ENST00000384817 110 ntBASIC-0.08□□□□□ -2.42
SNCAP37840 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
SNCAP37840 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
SNCAP37840 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.08□□□□□ -2.42
SNCAP37840 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.08□□□□□ -2.42
SNCAP37840 RNFT1P2-201ENST00000443064 757 ntBASIC-0.08□□□□□ -2.42
SNCAP37840 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.08□□□□□ -2.42
SNCAP37840 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.08□□□□□ -2.42
SNCAP37840 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.08□□□□□ -2.42
SNCAP37840 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.08□□□□□ -2.42
SNCAP37840 AP003327.1-201ENST00000529684 127 ntBASIC-0.08□□□□□ -2.42
SNCAP37840 BNIP3P8-201ENST00000597863 560 ntBASIC-0.08□□□□□ -2.42
SNCAP37840 AL031281.1-201ENST00000604049 488 ntBASIC-0.08□□□□□ -2.42
SNCAP37840 MIR6515-201ENST00000619843 57 ntBASIC-0.08□□□□□ -2.42
SNCAP37840 MIR103A1-201ENST00000362165 78 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 SNORA63.3-201ENST00000362682 132 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 RNU6-492P-201ENST00000363035 104 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 RNA5SP264-201ENST00000363115 107 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 SNORA16.2-201ENST00000390991 127 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 COX6CP10-201ENST00000416832 224 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 ELOCP9-201ENST00000418624 239 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 MTCO1P57-201ENST00000432182 261 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 RAD1P2-201ENST00000446414 663 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 RNU7-21P-201ENST00000459430 62 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 TMEM251P1-201ENST00000503717 318 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.09□□□□□ -2.42
SNCAP37840 RNU6-572P-201ENST00000516724 80 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.09□□□□□ -2.42
SNCAP37840 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC-0.09□□□□□ -2.42
SNCAP37840 AC025627.3-201ENST00000582078 182 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 SNORA4-201ENST00000584302 138 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 AP002906.1-201ENST00000603405 233 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 AP001033.2-201ENST00000609701 1003 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.09□□□□□ -2.42
SNCAP37840 AC107905.1-201ENST00000616204 426 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 AC099654.9-201ENST00000637055 678 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 CASC19-280ENST00000642102 1351 ntBASIC-0.09□□□□□ -2.42
SNCAP37840 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC-0.1□□□□□ -2.42
SNCAP37840 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.1□□□□□ -2.43
SNCAP37840 RNY1P8-201ENST00000383970 114 ntBASIC-0.1□□□□□ -2.43
SNCAP37840 CALM2P3-201ENST00000400429 449 ntBASIC-0.1□□□□□ -2.43
SNCAP37840 MIR1287-201ENST00000408492 90 ntBASIC-0.1□□□□□ -2.43
SNCAP37840 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.1□□□□□ -2.43
SNCAP37840 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-0.1□□□□□ -2.43
SNCAP37840 USP9YP14-201ENST00000430663 563 ntBASIC-0.1□□□□□ -2.43
SNCAP37840 LARP1BP3-201ENST00000437229 869 ntBASIC-0.1□□□□□ -2.43
SNCAP37840 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.1□□□□□ -2.43
SNCAP37840 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC-0.1□□□□□ -2.43
SNCAP37840 MTND5P14-201ENST00000441481 1267 ntBASIC-0.1□□□□□ -2.43
SNCAP37840 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.1□□□□□ -2.43
SNCAP37840 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC-0.1□□□□□ -2.43
SNCAP37840 AC093809.1-201ENST00000509155 340 ntBASIC-0.1□□□□□ -2.43
SNCAP37840 SNORA31.3-201ENST00000516029 96 ntBASIC-0.1□□□□□ -2.43
SNCAP37840 RNU6-760P-201ENST00000516078 97 ntBASIC-0.1□□□□□ -2.43
SNCAP37840 Y_RNA.676-201ENST00000516393 96 ntBASIC-0.1□□□□□ -2.43
SNCAP37840 AC091163.3-201ENST00000518269 1144 ntBASIC-0.1□□□□□ -2.43
SNCAP37840 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.1□□□□□ -2.43
SNCAP37840 AL136520.1-202ENST00000555494 763 ntBASIC-0.1□□□□□ -2.43
SNCAP37840 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.1□□□□□ -2.43
SNCAP37840 MIR4709-201ENST00000577272 72 ntBASIC-0.1□□□□□ -2.43
SNCAP37840 MIR4768-201ENST00000585270 74 ntBASIC-0.1□□□□□ -2.43
SNCAP37840 AC023932.2-201ENST00000603176 175 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms