Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 RNU6-2-201ENST00000384627 107 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 RNU6-29P-201ENST00000384637 107 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 RNU6-9-201ENST00000384776 107 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 RNU6-33P-201ENST00000384793 107 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 AC009310.1-201ENST00000414414 451 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.67□□□□□ -2.14
FDFT1P37268 BX510359.4-201ENST00000423750 193 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 AL121890.1-201ENST00000435457 205 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.67□□□□□ -2.14
FDFT1P37268 YWHAEP4-201ENST00000505390 198 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 MTND2P33-201ENST00000506452 1031 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.67□□□□□ -2.14
FDFT1P37268 AP001893.2-201ENST00000526949 202 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 AK6P1-201ENST00000540219 478 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.67□□□□□ -2.14
FDFT1P37268 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.67□□□□□ -2.14
FDFT1P37268 AC091135.1-201ENST00000585943 307 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.67□□□□□ -2.14
FDFT1P37268 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.67□□□□□ -2.14
FDFT1P37268 AL590229.1-201ENST00000603497 542 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 AC008945.2-201ENST00000606056 604 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 MIR502-201ENST00000606349 86 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 RNU6-6P-201ENST00000606623 107 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 AC091834.1-201ENST00000614543 472 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 U4.7-201ENST00000638126 106 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
FDFT1P37268 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
FDFT1P37268 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.67□□□□□ -2.14
FDFT1P37268 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.67□□□□□ -2.14
FDFT1P37268 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
FDFT1P37268 RNU1-58P-201ENST00000362413 163 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 Y_RNA.597-201ENST00000410463 100 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 RNU6-248P-201ENST00000410720 107 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 RNU6-1245P-201ENST00000411130 106 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 RN7SKP101-201ENST00000411376 320 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.66□□□□□ -2.14
FDFT1P37268 AL669831.1-202ENST00000428504 417 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 AC133104.1-201ENST00000429100 218 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 GTF2IP13-201ENST00000438487 386 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.66□□□□□ -2.14
FDFT1P37268 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.66□□□□□ -2.14
FDFT1P37268 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.66□□□□□ -2.14
FDFT1P37268 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.66□□□□□ -2.14
FDFT1P37268 AC008834.1-201ENST00000511612 175 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 MTCO3P28-201ENST00000513351 515 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 RNU6-377P-201ENST00000515965 102 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.66□□□□□ -2.14
FDFT1P37268 AP005435.4-201ENST00000529514 284 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.66□□□□□ -2.14
FDFT1P37268 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.66□□□□□ -2.14
FDFT1P37268 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.66□□□□□ -2.14
FDFT1P37268 NIFKP6-201ENST00000598115 845 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 CYP2C61P-201ENST00000604072 290 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 Z94722.1-201ENST00000604328 474 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 AC103810.8-201ENST00000607347 118 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 AC068944.2-201ENST00000610373 403 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
FDFT1P37268 RMST_6.1-201ENST00000611980 203 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 MIR6845-201ENST00000613182 61 ntBASIC1.66□□□□□ -2.14
FDFT1P37268 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
FDFT1P37268 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
FDFT1P37268 RNU6-1164P-201ENST00000364428 107 ntBASIC1.65□□□□□ -2.15
FDFT1P37268 RNU4-48P-201ENST00000365559 182 ntBASIC1.65□□□□□ -2.15
FDFT1P37268 RNU11-3P-201ENST00000391111 133 ntBASIC1.65□□□□□ -2.15
FDFT1P37268 BTF3L4P2-201ENST00000392798 346 ntBASIC1.65□□□□□ -2.15
FDFT1P37268 RNU4-46P-201ENST00000410818 138 ntBASIC1.65□□□□□ -2.15
FDFT1P37268 PIGFP2-201ENST00000421400 651 ntBASIC1.65□□□□□ -2.15
FDFT1P37268 AL590556.1-201ENST00000423231 483 ntBASIC1.65□□□□□ -2.15
FDFT1P37268 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.65□□□□□ -2.15
FDFT1P37268 RPS6P15-201ENST00000431996 751 ntBASIC1.65□□□□□ -2.15
FDFT1P37268 RPS15AP10-201ENST00000432472 382 ntBASIC1.65□□□□□ -2.15
FDFT1P37268 HSPE1P21-201ENST00000438283 308 ntBASIC1.65□□□□□ -2.15
FDFT1P37268 AC244505.5-201ENST00000443639 207 ntBASIC1.65□□□□□ -2.15
FDFT1P37268 MTND1P18-201ENST00000448191 573 ntBASIC1.65□□□□□ -2.15
FDFT1P37268 FDX1P2-201ENST00000450769 375 ntBASIC1.65□□□□□ -2.15
FDFT1P37268 MTND1P27-201ENST00000451117 902 ntBASIC1.65□□□□□ -2.15
FDFT1P37268 AC022364.2-201ENST00000457963 554 ntBASIC1.65□□□□□ -2.15
FDFT1P37268 snoU13.26-201ENST00000459452 105 ntBASIC1.65□□□□□ -2.15
FDFT1P37268 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.65□□□□□ -2.15
FDFT1P37268 MTCO3P7-201ENST00000510008 774 ntBASIC1.65□□□□□ -2.15
FDFT1P37268 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.65□□□□□ -2.15
FDFT1P37268 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.65□□□□□ -2.15
FDFT1P37268 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.65□□□□□ -2.15
FDFT1P37268 CBX3P4-201ENST00000538909 354 ntBASIC1.65□□□□□ -2.15
FDFT1P37268 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.65□□□□□ -2.15
FDFT1P37268 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.65□□□□□ -2.15
FDFT1P37268 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.15
FDFT1P37268 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
FDFT1P37268 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
FDFT1P37268 Y_RNA.99-201ENST00000363138 105 ntBASIC1.64□□□□□ -2.15
FDFT1P37268 RNU6-181P-201ENST00000363225 107 ntBASIC1.64□□□□□ -2.15
FDFT1P37268 RNU6-105P-201ENST00000363909 104 ntBASIC1.64□□□□□ -2.15
FDFT1P37268 RNU6-1222P-201ENST00000384615 107 ntBASIC1.64□□□□□ -2.15
FDFT1P37268 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.64□□□□□ -2.15
FDFT1P37268 POLHP1-201ENST00000411806 470 ntBASIC1.64□□□□□ -2.15
FDFT1P37268 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
FDFT1P37268 CBX3P6-201ENST00000430257 527 ntBASIC1.64□□□□□ -2.15
FDFT1P37268 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.64□□□□□ -2.15
FDFT1P37268 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.64□□□□□ -2.15
FDFT1P37268 SNRPGP7-201ENST00000469016 106 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms