Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CLCN1P35523 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLCN1P35523 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CLCN1P35523 AC134026.1-201ENST00000623249 2239 ntBASIC5□□□□□ -1.61
CLCN1P35523 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CLCN1P35523 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
CLCN1P35523 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
CLCN1P35523 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC5□□□□□ -1.61
CLCN1P35523 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLCN1P35523 SNORD20-201ENST00000384550 80 ntBASIC5□□□□□ -1.61
CLCN1P35523 RN7SKP177-201ENST00000410567 355 ntBASIC5□□□□□ -1.61
CLCN1P35523 RN7SKP100-201ENST00000411258 284 ntBASIC5□□□□□ -1.61
CLCN1P35523 RPL23AP82-202ENST00000427528 469 ntBASIC5□□□□□ -1.61
CLCN1P35523 AL049745.1-201ENST00000433953 286 ntBASIC5□□□□□ -1.61
CLCN1P35523 AC004386.2-201ENST00000441858 148 ntBASIC5□□□□□ -1.61
CLCN1P35523 NDUFS5P3-201ENST00000450668 321 ntBASIC5□□□□□ -1.61
CLCN1P35523 snoU13.28-201ENST00000459235 104 ntBASIC5□□□□□ -1.61
CLCN1P35523 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5□□□□□ -1.61
CLCN1P35523 AC022616.8-201ENST00000533569 253 ntBASIC5□□□□□ -1.61
CLCN1P35523 RPL23AP97-201ENST00000568955 471 ntBASIC5□□□□□ -1.61
CLCN1P35523 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5□□□□□ -1.61
CLCN1P35523 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
CLCN1P35523 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLCN1P35523 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
CLCN1P35523 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CLCN1P35523 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN1P35523 LINC02471-203ENST00000641941 4752 ntBASIC4.99□□□□□ -1.61
CLCN1P35523 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN1P35523 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN1P35523 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CLCN1P35523 SNORD115-30-201ENST00000364117 82 ntBASIC4.99□□□□□ -1.61
CLCN1P35523 snoU2_19.4-201ENST00000364329 80 ntBASIC4.99□□□□□ -1.61
CLCN1P35523 Y_RNA.261-201ENST00000364631 102 ntBASIC4.99□□□□□ -1.61
CLCN1P35523 RNA5SP205-201ENST00000364653 136 ntBASIC4.99□□□□□ -1.61
CLCN1P35523 RNU6-710P-201ENST00000410424 105 ntBASIC4.99□□□□□ -1.61
CLCN1P35523 AC016397.1-201ENST00000412463 242 ntBASIC4.99□□□□□ -1.61
CLCN1P35523 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.99□□□□□ -1.61
CLCN1P35523 RNU2-58P-201ENST00000516403 183 ntBASIC4.99□□□□□ -1.61
CLCN1P35523 RNU6-344P-201ENST00000516635 111 ntBASIC4.99□□□□□ -1.61
CLCN1P35523 AL110118.1-201ENST00000553543 400 ntBASIC4.99□□□□□ -1.61
CLCN1P35523 MIR4737-201ENST00000583979 81 ntBASIC4.99□□□□□ -1.61
CLCN1P35523 DNAJC19P2-201ENST00000593340 302 ntBASIC4.99□□□□□ -1.61
CLCN1P35523 RPS15AP11-201ENST00000594193 385 ntBASIC4.99□□□□□ -1.61
CLCN1P35523 AL391358.1-201ENST00000605342 190 ntBASIC4.99□□□□□ -1.61
CLCN1P35523 TCL6_2.1-201ENST00000615162 119 ntBASIC4.99□□□□□ -1.61
CLCN1P35523 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.99□□□□□ -1.61
CLCN1P35523 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.99□□□□□ -1.61
CLCN1P35523 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN1P35523 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.99□□□□□ -1.61
CLCN1P35523 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCN1P35523 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCN1P35523 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCN1P35523 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.98□□□□□ -1.61
CLCN1P35523 RNU6-529P-201ENST00000363383 104 ntBASIC4.98□□□□□ -1.61
CLCN1P35523 RNU6-1048P-201ENST00000364054 107 ntBASIC4.98□□□□□ -1.61
CLCN1P35523 RNU6-748P-201ENST00000384648 107 ntBASIC4.98□□□□□ -1.61
CLCN1P35523 MIR626-201ENST00000385032 94 ntBASIC4.98□□□□□ -1.61
CLCN1P35523 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CLCN1P35523 RNA5SP201-201ENST00000410316 124 ntBASIC4.98□□□□□ -1.61
CLCN1P35523 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.98□□□□□ -1.61
CLCN1P35523 ABCF2P2-201ENST00000450549 296 ntBASIC4.98□□□□□ -1.61
CLCN1P35523 AL137159.1-201ENST00000452808 512 ntBASIC4.98□□□□□ -1.61
CLCN1P35523 AL441985.1-201ENST00000457727 251 ntBASIC4.98□□□□□ -1.61
CLCN1P35523 AC146507.2-201ENST00000460608 476 ntBASIC4.98□□□□□ -1.61
CLCN1P35523 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.98□□□□□ -1.61
CLCN1P35523 RNU6-971P-201ENST00000516920 106 ntBASIC4.98□□□□□ -1.61
CLCN1P35523 EIF4A1P12-201ENST00000551910 141 ntBASIC4.98□□□□□ -1.61
CLCN1P35523 MIR3667-201ENST00000581025 74 ntBASIC4.98□□□□□ -1.61
CLCN1P35523 MIR5006-201ENST00000583027 110 ntBASIC4.98□□□□□ -1.61
CLCN1P35523 AL359881.1-201ENST00000602916 267 ntBASIC4.98□□□□□ -1.61
CLCN1P35523 AC091152.3-201ENST00000604227 325 ntBASIC4.98□□□□□ -1.61
CLCN1P35523 AC068205.3-201ENST00000636385 468 ntBASIC4.98□□□□□ -1.61
CLCN1P35523 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.98□□□□□ -1.61
CLCN1P35523 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCN1P35523 ZNF137P-201ENST00000456718 1920 ntBASIC4.97□□□□□ -1.61
CLCN1P35523 RNA5SP307-201ENST00000362863 116 ntBASIC4.97□□□□□ -1.61
CLCN1P35523 RNU6-199P-201ENST00000362954 107 ntBASIC4.97□□□□□ -1.61
CLCN1P35523 RNU6-899P-201ENST00000363947 107 ntBASIC4.97□□□□□ -1.61
CLCN1P35523 U1.1-201ENST00000384101 164 ntBASIC4.97□□□□□ -1.61
CLCN1P35523 SNORA72.4-201ENST00000384174 132 ntBASIC4.97□□□□□ -1.61
CLCN1P35523 RNU6-376P-201ENST00000384731 106 ntBASIC4.97□□□□□ -1.61
CLCN1P35523 SNORA3C-201ENST00000408792 125 ntBASIC4.97□□□□□ -1.61
CLCN1P35523 AC004866.1-201ENST00000411748 78 ntBASIC4.97□□□□□ -1.61
CLCN1P35523 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCN1P35523 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.97□□□□□ -1.61
CLCN1P35523 MTND4LP9-201ENST00000427694 174 ntBASIC4.97□□□□□ -1.61
CLCN1P35523 AL645939.1-201ENST00000453429 797 ntBASIC4.97□□□□□ -1.61
CLCN1P35523 S100A11P1-201ENST00000477525 312 ntBASIC4.97□□□□□ -1.61
CLCN1P35523 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.97□□□□□ -1.61
CLCN1P35523 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.97□□□□□ -1.61
CLCN1P35523 Y_RNA.802-201ENST00000614892 130 ntBASIC4.97□□□□□ -1.61
CLCN1P35523 AC083809.1-201ENST00000615051 472 ntBASIC4.97□□□□□ -1.61
CLCN1P35523 MIR6853-201ENST00000619642 74 ntBASIC4.97□□□□□ -1.61
CLCN1P35523 U7.8-201ENST00000619968 63 ntBASIC4.97□□□□□ -1.61
CLCN1P35523 MIR6810-201ENST00000622701 70 ntBASIC4.97□□□□□ -1.61
CLCN1P35523 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.96□□□□□ -1.61
CLCN1P35523 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.96□□□□□ -1.62
CLCN1P35523 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLCN1P35523 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.96□□□□□ -1.62
CLCN1P35523 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms