Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC245014.2-201ENST00000603689 287 ntBASIC1.69□□□□□ -2.14
RORAP35398 Z84480.1-201ENST00000605131 311 ntBASIC1.69□□□□□ -2.14
RORAP35398 AC246785.4-201ENST00000605374 287 ntBASIC1.69□□□□□ -2.14
RORAP35398 AL132822.1-201ENST00000617063 513 ntBASIC1.69□□□□□ -2.14
RORAP35398 AC136475.10-201ENST00000620253 385 ntBASIC1.69□□□□□ -2.14
RORAP35398 AC007792.1-201ENST00000623023 402 ntBASIC1.69□□□□□ -2.14
RORAP35398 AC097372.5-201ENST00000623665 376 ntBASIC1.69□□□□□ -2.14
RORAP35398 U6.114-201ENST00000636407 96 ntBASIC1.69□□□□□ -2.14
RORAP35398 RNU6-1287P-201ENST00000362914 107 ntBASIC1.68□□□□□ -2.14
RORAP35398 RNU6-181P-201ENST00000363225 107 ntBASIC1.68□□□□□ -2.14
RORAP35398 RNA5SP190-201ENST00000365222 118 ntBASIC1.68□□□□□ -2.14
RORAP35398 RNU5E-7P-201ENST00000365290 117 ntBASIC1.68□□□□□ -2.14
RORAP35398 RNU6-1060P-201ENST00000384664 107 ntBASIC1.68□□□□□ -2.14
RORAP35398 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.68□□□□□ -2.14
RORAP35398 RNU2-32P-201ENST00000411193 191 ntBASIC1.68□□□□□ -2.14
RORAP35398 RPS20P15-201ENST00000412792 311 ntBASIC1.68□□□□□ -2.14
RORAP35398 RPS6P15-201ENST00000431996 751 ntBASIC1.68□□□□□ -2.14
RORAP35398 AL596276.1-201ENST00000434465 418 ntBASIC1.68□□□□□ -2.14
RORAP35398 MTND1P18-201ENST00000448191 573 ntBASIC1.68□□□□□ -2.14
RORAP35398 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.68□□□□□ -2.14
RORAP35398 AC006512.1-201ENST00000468816 291 ntBASIC1.68□□□□□ -2.14
RORAP35398 SNORA25.15-201ENST00000516487 89 ntBASIC1.68□□□□□ -2.14
RORAP35398 RNU6-1178P-201ENST00000516674 107 ntBASIC1.68□□□□□ -2.14
RORAP35398 RNU6-445P-201ENST00000516949 107 ntBASIC1.68□□□□□ -2.14
RORAP35398 RN7SKP256-201ENST00000517201 314 ntBASIC1.68□□□□□ -2.14
RORAP35398 GNAI2P1-201ENST00000541815 315 ntBASIC1.68□□□□□ -2.14
RORAP35398 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.68□□□□□ -2.14
RORAP35398 AP000942.3-201ENST00000603702 160 ntBASIC1.68□□□□□ -2.14
RORAP35398 AC006566.1-201ENST00000608943 513 ntBASIC1.68□□□□□ -2.14
RORAP35398 AC099842.1-201ENST00000619919 596 ntBASIC1.68□□□□□ -2.14
RORAP35398 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.68□□□□□ -2.14
RORAP35398 U4.7-201ENST00000638126 106 ntBASIC1.68□□□□□ -2.14
RORAP35398 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RORAP35398 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.67□□□□□ -2.14
RORAP35398 SNORD115-3-201ENST00000363100 82 ntBASIC1.67□□□□□ -2.14
RORAP35398 Y_RNA.201-201ENST00000364052 96 ntBASIC1.67□□□□□ -2.14
RORAP35398 RNU6-546P-201ENST00000383991 107 ntBASIC1.67□□□□□ -2.14
RORAP35398 MIR29C-201ENST00000385231 88 ntBASIC1.67□□□□□ -2.14
RORAP35398 SNORA17.3-201ENST00000391159 129 ntBASIC1.67□□□□□ -2.14
RORAP35398 AL049545.1-201ENST00000401856 572 ntBASIC1.67□□□□□ -2.14
RORAP35398 MIR1262-201ENST00000408276 93 ntBASIC1.67□□□□□ -2.14
RORAP35398 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
RORAP35398 AC133104.1-201ENST00000429100 218 ntBASIC1.67□□□□□ -2.14
RORAP35398 AC245102.2-201ENST00000448956 180 ntBASIC1.67□□□□□ -2.14
RORAP35398 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.67□□□□□ -2.14
RORAP35398 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.67□□□□□ -2.14
RORAP35398 RNU7-182P-201ENST00000459009 62 ntBASIC1.67□□□□□ -2.14
RORAP35398 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.67□□□□□ -2.14
RORAP35398 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
RORAP35398 AC074344.1-201ENST00000512823 224 ntBASIC1.67□□□□□ -2.14
RORAP35398 AC104136.1-201ENST00000512969 394 ntBASIC1.67□□□□□ -2.14
RORAP35398 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.67□□□□□ -2.14
RORAP35398 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.67□□□□□ -2.14
RORAP35398 AC024614.2-201ENST00000577584 372 ntBASIC1.67□□□□□ -2.14
RORAP35398 MIR4703-201ENST00000577728 79 ntBASIC1.67□□□□□ -2.14
RORAP35398 MIR4713-201ENST00000582691 75 ntBASIC1.67□□□□□ -2.14
RORAP35398 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.67□□□□□ -2.14
RORAP35398 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.67□□□□□ -2.14
RORAP35398 AC123912.5-201ENST00000605470 343 ntBASIC1.67□□□□□ -2.14
RORAP35398 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.67□□□□□ -2.14
RORAP35398 MIR8081-201ENST00000611533 95 ntBASIC1.67□□□□□ -2.14
RORAP35398 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
RORAP35398 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
RORAP35398 snoU2_19.1-201ENST00000362361 80 ntBASIC1.66□□□□□ -2.14
RORAP35398 Y_RNA.324-201ENST00000365165 102 ntBASIC1.66□□□□□ -2.14
RORAP35398 RNU4-48P-201ENST00000365559 182 ntBASIC1.66□□□□□ -2.14
RORAP35398 RNU6-611P-201ENST00000384276 104 ntBASIC1.66□□□□□ -2.14
RORAP35398 MIR29B2-201ENST00000385055 81 ntBASIC1.66□□□□□ -2.14
RORAP35398 MIR1283-2-201ENST00000408621 87 ntBASIC1.66□□□□□ -2.14
RORAP35398 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.66□□□□□ -2.14
RORAP35398 USP9YP18-201ENST00000425912 695 ntBASIC1.66□□□□□ -2.14
RORAP35398 IFNA20P-201ENST00000436840 528 ntBASIC1.66□□□□□ -2.14
RORAP35398 HSPE1P21-201ENST00000438283 308 ntBASIC1.66□□□□□ -2.14
RORAP35398 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.66□□□□□ -2.14
RORAP35398 AL122001.1-201ENST00000457027 370 ntBASIC1.66□□□□□ -2.14
RORAP35398 SNORD13-201ENST00000459299 104 ntBASIC1.66□□□□□ -2.14
RORAP35398 AC087884.1-201ENST00000469738 328 ntBASIC1.66□□□□□ -2.14
RORAP35398 RPL30P1-201ENST00000488676 339 ntBASIC1.66□□□□□ -2.14
RORAP35398 RNA5SP503-201ENST00000517047 117 ntBASIC1.66□□□□□ -2.14
RORAP35398 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.66□□□□□ -2.14
RORAP35398 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.66□□□□□ -2.14
RORAP35398 AP005435.4-201ENST00000529514 284 ntBASIC1.66□□□□□ -2.14
RORAP35398 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.66□□□□□ -2.14
RORAP35398 MIR4419B-201ENST00000577260 68 ntBASIC1.66□□□□□ -2.14
RORAP35398 AL136363.2-201ENST00000604173 851 ntBASIC1.66□□□□□ -2.14
RORAP35398 AC104073.3-201ENST00000610942 955 ntBASIC1.66□□□□□ -2.14
RORAP35398 AL359314.1-201ENST00000616913 261 ntBASIC1.66□□□□□ -2.14
RORAP35398 SEPT14P19-203ENST00000633205 211 ntBASIC1.66□□□□□ -2.14
RORAP35398 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.66□□□□□ -2.14
RORAP35398 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.65□□□□□ -2.14
RORAP35398 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
RORAP35398 RNU6-37P-201ENST00000362692 107 ntBASIC1.65□□□□□ -2.15
RORAP35398 RNU6-105P-201ENST00000363909 104 ntBASIC1.65□□□□□ -2.15
RORAP35398 RNU6-11P-201ENST00000364234 107 ntBASIC1.65□□□□□ -2.15
RORAP35398 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
RORAP35398 RNU6-25P-201ENST00000383873 107 ntBASIC1.65□□□□□ -2.15
RORAP35398 RNU6-1-201ENST00000383898 107 ntBASIC1.65□□□□□ -2.15
RORAP35398 RNU6-48P-201ENST00000384161 107 ntBASIC1.65□□□□□ -2.15
RORAP35398 RNU6-36P-201ENST00000384172 107 ntBASIC1.65□□□□□ -2.15
RORAP35398 RNU6-4P-201ENST00000384205 107 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms