Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RNU6-703P-201ENST00000516946 107 ntBASIC-0.11□□□□□ -2.43
CLIP1P30622 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
CLIP1P30622 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.11□□□□□ -2.43
CLIP1P30622 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.11□□□□□ -2.43
CLIP1P30622 BNIP3P31-201ENST00000604515 566 ntBASIC-0.11□□□□□ -2.43
CLIP1P30622 AC100812.1-201ENST00000607622 580 ntBASIC-0.11□□□□□ -2.43
CLIP1P30622 RMST_4.1-201ENST00000616886 107 ntBASIC-0.11□□□□□ -2.43
CLIP1P30622 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
CLIP1P30622 ZNF849P-201ENST00000594711 1566 ntBASIC-0.11□□□□□ -2.43
CLIP1P30622 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.11□□□□□ -2.43
CLIP1P30622 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
CLIP1P30622 MIR409-201ENST00000362237 79 ntBASIC-0.12□□□□□ -2.43
CLIP1P30622 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.12□□□□□ -2.43
CLIP1P30622 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.12□□□□□ -2.43
CLIP1P30622 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.12□□□□□ -2.43
CLIP1P30622 AL008629.1-201ENST00000438615 184 ntBASIC-0.12□□□□□ -2.43
CLIP1P30622 RPS26P48-201ENST00000491713 339 ntBASIC-0.12□□□□□ -2.43
CLIP1P30622 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.12□□□□□ -2.43
CLIP1P30622 AC116655.1-201ENST00000508324 901 ntBASIC-0.12□□□□□ -2.43
CLIP1P30622 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.12□□□□□ -2.43
CLIP1P30622 RNU5B-3P-201ENST00000516601 115 ntBASIC-0.12□□□□□ -2.43
CLIP1P30622 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-0.12□□□□□ -2.43
CLIP1P30622 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC-0.12□□□□□ -2.43
CLIP1P30622 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.12□□□□□ -2.43
CLIP1P30622 AL353997.4-201ENST00000586196 166 ntBASIC-0.12□□□□□ -2.43
CLIP1P30622 AC090330.1-201ENST00000588646 764 ntBASIC-0.12□□□□□ -2.43
CLIP1P30622 BNIP3P26-201ENST00000600827 554 ntBASIC-0.12□□□□□ -2.43
CLIP1P30622 AL356157.2-201ENST00000605122 111 ntBASIC-0.12□□□□□ -2.43
CLIP1P30622 AL360219.1-201ENST00000610230 366 ntBASIC-0.12□□□□□ -2.43
CLIP1P30622 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.12□□□□□ -2.43
CLIP1P30622 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.13□□□□□ -2.43
CLIP1P30622 RNU6-30P-201ENST00000384561 107 ntBASIC-0.13□□□□□ -2.43
CLIP1P30622 BTF3L4P3-201ENST00000418879 476 ntBASIC-0.13□□□□□ -2.43
CLIP1P30622 AL121578.1-201ENST00000428051 892 ntBASIC-0.13□□□□□ -2.43
CLIP1P30622 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.13□□□□□ -2.43
CLIP1P30622 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.13□□□□□ -2.43
CLIP1P30622 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.13□□□□□ -2.43
CLIP1P30622 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.13□□□□□ -2.43
CLIP1P30622 OR6C5P-201ENST00000452388 923 ntBASIC-0.13□□□□□ -2.43
CLIP1P30622 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC-0.13□□□□□ -2.43
CLIP1P30622 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.13□□□□□ -2.43
CLIP1P30622 LARP7P2-201ENST00000575306 125 ntBASIC-0.13□□□□□ -2.43
CLIP1P30622 AC098483.2-201ENST00000603158 454 ntBASIC-0.13□□□□□ -2.43
CLIP1P30622 AP002906.1-201ENST00000603405 233 ntBASIC-0.13□□□□□ -2.43
CLIP1P30622 AC091805.2-201ENST00000603848 235 ntBASIC-0.13□□□□□ -2.43
CLIP1P30622 AC012557.2-201ENST00000605919 418 ntBASIC-0.13□□□□□ -2.43
CLIP1P30622 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC-0.13□□□□□ -2.43
CLIP1P30622 AL159972.1-201ENST00000625150 448 ntBASIC-0.13□□□□□ -2.43
CLIP1P30622 SNORA36.2-201ENST00000384004 127 ntBASIC-0.13□□□□□ -2.43
CLIP1P30622 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
CLIP1P30622 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.13□□□□□ -2.43
CLIP1P30622 AC011233.1-201ENST00000422812 283 ntBASIC-0.13□□□□□ -2.43
CLIP1P30622 RAD1P2-201ENST00000446414 663 ntBASIC-0.13□□□□□ -2.43
CLIP1P30622 snoU13.30-201ENST00000458951 104 ntBASIC-0.13□□□□□ -2.43
CLIP1P30622 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.13□□□□□ -2.43
CLIP1P30622 AC027104.1-201ENST00000563702 681 ntBASIC-0.13□□□□□ -2.43
CLIP1P30622 RPL21P136-201ENST00000605378 396 ntBASIC-0.13□□□□□ -2.43
CLIP1P30622 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
CLIP1P30622 SNORD114-19-201ENST00000363072 75 ntBASIC-0.14□□□□□ -2.43
CLIP1P30622 AC007435.1-201ENST00000421086 415 ntBASIC-0.14□□□□□ -2.43
CLIP1P30622 AC245047.7-201ENST00000440265 293 ntBASIC-0.14□□□□□ -2.43
CLIP1P30622 BRK1P2-201ENST00000442875 223 ntBASIC-0.14□□□□□ -2.43
CLIP1P30622 AC114982.2-201ENST00000461396 358 ntBASIC-0.14□□□□□ -2.43
CLIP1P30622 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-0.14□□□□□ -2.43
CLIP1P30622 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-0.14□□□□□ -2.43
CLIP1P30622 RNU6-491P-201ENST00000516099 110 ntBASIC-0.14□□□□□ -2.43
CLIP1P30622 RNU6-528P-201ENST00000516926 100 ntBASIC-0.14□□□□□ -2.43
CLIP1P30622 SUMO2P16-201ENST00000519475 264 ntBASIC-0.14□□□□□ -2.43
CLIP1P30622 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-0.14□□□□□ -2.43
CLIP1P30622 AL442163.3-201ENST00000554110 156 ntBASIC-0.14□□□□□ -2.43
CLIP1P30622 AL132657.2-201ENST00000564417 358 ntBASIC-0.14□□□□□ -2.43
CLIP1P30622 MIR3678-201ENST00000578455 94 ntBASIC-0.14□□□□□ -2.43
CLIP1P30622 AC073410.2-201ENST00000603240 332 ntBASIC-0.14□□□□□ -2.43
CLIP1P30622 AL355598.1-201ENST00000604169 202 ntBASIC-0.14□□□□□ -2.43
CLIP1P30622 RNU6-91P-201ENST00000607774 107 ntBASIC-0.14□□□□□ -2.43
CLIP1P30622 AL118556.2-201ENST00000614375 824 ntBASIC-0.14□□□□□ -2.43
CLIP1P30622 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
CLIP1P30622 AC010615.1-201ENST00000594254 1764 ntBASIC-0.15□□□□□ -2.43
CLIP1P30622 RNU6-43P-201ENST00000384302 107 ntBASIC-0.15□□□□□ -2.43
CLIP1P30622 MIR186-201ENST00000384988 86 ntBASIC-0.15□□□□□ -2.43
CLIP1P30622 TXNL1P1-201ENST00000429528 554 ntBASIC-0.15□□□□□ -2.43
CLIP1P30622 AC005345.1-201ENST00000431868 217 ntBASIC-0.15□□□□□ -2.43
CLIP1P30622 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.15□□□□□ -2.43
CLIP1P30622 AL606662.1-201ENST00000445763 553 ntBASIC-0.15□□□□□ -2.43
CLIP1P30622 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.15□□□□□ -2.43
CLIP1P30622 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.15□□□□□ -2.43
CLIP1P30622 AC093534.1-201ENST00000504977 132 ntBASIC-0.15□□□□□ -2.43
CLIP1P30622 RNA5SP481-201ENST00000516814 122 ntBASIC-0.15□□□□□ -2.43
CLIP1P30622 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-0.15□□□□□ -2.43
CLIP1P30622 BPTFP1-201ENST00000579209 492 ntBASIC-0.15□□□□□ -2.43
CLIP1P30622 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.15□□□□□ -2.43
CLIP1P30622 AL162730.1-201ENST00000605734 292 ntBASIC-0.15□□□□□ -2.43
CLIP1P30622 AP005212.4-201ENST00000614206 710 ntBASIC-0.15□□□□□ -2.43
CLIP1P30622 LINC02555-201ENST00000563933 1951 ntBASIC-0.16□□□□□ -2.43
CLIP1P30622 RNU6V-201ENST00000384105 107 ntBASIC-0.16□□□□□ -2.44
CLIP1P30622 RNU6-39P-201ENST00000384344 107 ntBASIC-0.16□□□□□ -2.44
CLIP1P30622 HMGN2P22-201ENST00000427588 175 ntBASIC-0.16□□□□□ -2.44
CLIP1P30622 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-0.16□□□□□ -2.44
CLIP1P30622 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.16□□□□□ -2.44
CLIP1P30622 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms